Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093516

Identifier: 20093516

GI number: 20093516

Start: 70930

End: 71757

Strand: Direct

Name: 20093516

Synonym: MK0076

Alternate gene names: NA

Gene position: 70930-71757 (Clockwise)

Preceding gene: 20093515

Following gene: 20093517

Centisome position: 4.18

GC content: 60.39

Gene sequence:

>828_bases
TTGATCGACATTTCGTCCCTGTCATGGGCCGTAGCGCTCGGAGTAGTTCGAGGTCTCTACGTGTTCGCGGGATCGTTCAT
CGCGGCGGCCGTCTACCGGTACGTGGCGGAGGAGAGGATCCGAATGACGACCTCCGCCTTCATGGGTCTTTTAACCGCCG
GGTTCGCGGCCGGCCCCAAAGAACTCACGGCACTCACGTACCAAAATCCGAACGTGGAGATGATCGCGTGGGCTATCGCC
ACCTTGTTCGCGATACCCGCCAGGACCTACGGGGACGCTATCGGTGAGAGGATTCTCCGGGCGAGGATACGAGCATCGAT
GAACCCCAGAACTAAGGTTTACAGGCTCCCCGAGAACCCCAACGAGATCAAGGATATCCCCGGAGAACCACCCGCGCCCA
TGGAGGTCAAAGAACGGATCGCGGGACGCGAGTACGAGTTCCCTCGAGGCACTCCTAAGGAGGAAGTTGAGCGAGTGATC
AAGCGAGATTTGGAGAGCGAGACCGGGATAGGTCGCGCCGTAGTCCGCGTGCGAAACGGCGACGTCGAGGTACTCGTAGC
GGGTGCGAAGCCCCCGGTCTCGCACACGCTCCCTCCGGACAAGGTCGCCGTTTCCGTGGAACCACTAGGCGGCGCCATCC
ACATCGGAGAGGGAGATCGTGTACGTGTGTTCGTGGACGGTCGCGAGCTGGGTGAAGCGGAGGTATGGCGGCGGGTAGAT
GATCGGGTAGTATTGGTGATGGAAGAACGCACTGCCGAAGAGCTGCTGAAGGAGATCACTCAAGGCAAGCAGGTGTCCCT
TATGGCGGTGAGAGGGGAGGGAAGTTGA

Upstream 100 bases:

>100_bases
AGATCAAGATAGGTGACGTAACGCTGGTCCGCGAGGGAGGTAAGTTCCGGGTCGTAGAGCCTGGAACGGTTCGGCTCGGA
GATGAGGTGGTGGAAGTAGG

Downstream 100 bases:

>100_bases
AGCGTGAGCGCGTTCGGATCGAGGGAGGCTCGATCAGGGTAGACGGACCGTCCCGGGCGCGAGTAATTCGAGGTGAAGCG
ACCACGAACAAAGGTACCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA
TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI
KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD
DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS

Sequences:

>Translated_275_residues
MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA
TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI
KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD
DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS
>Mature_275_residues
MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPKELTALTYQNPNVEMIAWAIA
TLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENPNEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVI
KRDLESETGIGRAVVRVRNGDVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD
DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30221; Mature: 30221

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ELTALTYQNPNVEMIAWAIATLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENP
HHEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
NEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVIKRDLESETGIGRAVVRVRNG
CHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC
DVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCC
DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS
CEEEEEECHHHHHHHHHHHHCCCEEEEEEEECCCC
>Mature Secondary Structure
MIDISSLSWAVALGVVRGLYVFAGSFIAAAVYRYVAEERIRMTTSAFMGLLTAGFAAGPK
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
ELTALTYQNPNVEMIAWAIATLFAIPARTYGDAIGERILRARIRASMNPRTKVYRLPENP
HHEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
NEIKDIPGEPPAPMEVKERIAGREYEFPRGTPKEEVERVIKRDLESETGIGRAVVRVRNG
CHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECC
DVEVLVAGAKPPVSHTLPPDKVAVSVEPLGGAIHIGEGDRVRVFVDGRELGEAEVWRRVD
CEEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEECCCCEEEEEECCCCCCHHHHHHHCC
DRVVLVMEERTAEELLKEITQGKQVSLMAVRGEGS
CEEEEEECHHHHHHHHHHHHCCCEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA