Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20093496

Identifier: 20093496

GI number: 20093496

Start: 55284

End: 55847

Strand: Reverse

Name: 20093496

Synonym: MK0056

Alternate gene names: NA

Gene position: 55847-55284 (Counterclockwise)

Preceding gene: 20093497

Following gene: 20093495

Centisome position: 3.29

GC content: 62.77

Gene sequence:

>564_bases
ATGCCTAAGCGCGCTGGCAGGGTGACTATCGGCCTGTACAATTCCTACGACCCGCGGCGCTTCCACGAGATACACGCCCG
GACGATCGCCCGGGCAGCACCGCTCTGCGTGGCCTTCGACTTCAAGCTCGCTCTCTTCGGGTTCCCACTCGACGATCTGG
GCGTGGAGACTCCGCACGAACTCGCCGAGTACGTCGCCGAGGAGACCACTATCGGCGCTTCGGGACGTGAGGTGCTGGTG
CTGGCCGAGCGCAACCTGTTGGAGGTTTACGACTACCCAGTGCGTGGCTTCCCACCTCAACTCGGTACGATCGTCGGGAC
GACGTGTCGTCCCGACGAGCGGAAGGCCATCGAACCCGAGGACGTGGTTCGAGAAATCCTCCGGCCCCGATCTGTAACCC
TGGTTTTCGGCCTAGGACGGCGTGGACTGCCCGCTGAGGTACTCGAAGCGTGTGAGTACCACCTCGACATCACCGGCCGT
AGGATCTCCCTCGAAACCGCCACGGCCATCGGGGCTGTTACCGCCGTTATCGGGCACTTGATCAAGAAGGAACTCGGAGA
GTGA

Upstream 100 bases:

>100_bases
GTAGTGCTCAAACGCACGGCGACTCGCCACCGTCTTCCCGAACCTATCCGGGTCGCCCACTTCATCGCCACCGGAGTGAC
CAAGGGGGAATCTTCCAGCG

Downstream 100 bases:

>100_bases
GCAGCAGGTGAGTGCTCCCACCGACGGAGCTACCGTTATGGTTTTCATAACGATTTGGGCCTTGGTGGGCCCGCCGGGAT
TTGAACCCGGGTCACGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLV
LAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGR
RISLETATAIGAVTAVIGHLIKKELGE

Sequences:

>Translated_187_residues
MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLV
LAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGR
RISLETATAIGAVTAVIGHLIKKELGE
>Mature_186_residues
PKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLVL
AERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRR
ISLETATAIGAVTAVIGHLIKKELGE

Specific function: Unknown

COG id: COG1772

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007501 [H]

Pfam domain/function: PF04407 DUF531 [H]

EC number: NA

Molecular weight: Translated: 20677; Mature: 20546

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHE
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCHHHCCCCCHHH
LAEYVAEETTIGASGREVLVLAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPE
HHHHHHHHCCCCCCCCEEEEEECCCEEEHHCCCCCCCCCCHHHEECCCCCCCCCCCCCHH
DVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRRISLETATAIGAVTAVIGHL
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
IKKELGE
HHHHHCC
>Mature Secondary Structure 
PKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHE
CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCHHHCCCCCHHH
LAEYVAEETTIGASGREVLVLAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPE
HHHHHHHHCCCCCCCCEEEEEECCCEEEHHCCCCCCCCCCHHHEECCCCCCCCCCCCCHH
DVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRRISLETATAIGAVTAVIGHL
HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH
IKKELGE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]