| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093496
Identifier: 20093496
GI number: 20093496
Start: 55284
End: 55847
Strand: Reverse
Name: 20093496
Synonym: MK0056
Alternate gene names: NA
Gene position: 55847-55284 (Counterclockwise)
Preceding gene: 20093497
Following gene: 20093495
Centisome position: 3.29
GC content: 62.77
Gene sequence:
>564_bases ATGCCTAAGCGCGCTGGCAGGGTGACTATCGGCCTGTACAATTCCTACGACCCGCGGCGCTTCCACGAGATACACGCCCG GACGATCGCCCGGGCAGCACCGCTCTGCGTGGCCTTCGACTTCAAGCTCGCTCTCTTCGGGTTCCCACTCGACGATCTGG GCGTGGAGACTCCGCACGAACTCGCCGAGTACGTCGCCGAGGAGACCACTATCGGCGCTTCGGGACGTGAGGTGCTGGTG CTGGCCGAGCGCAACCTGTTGGAGGTTTACGACTACCCAGTGCGTGGCTTCCCACCTCAACTCGGTACGATCGTCGGGAC GACGTGTCGTCCCGACGAGCGGAAGGCCATCGAACCCGAGGACGTGGTTCGAGAAATCCTCCGGCCCCGATCTGTAACCC TGGTTTTCGGCCTAGGACGGCGTGGACTGCCCGCTGAGGTACTCGAAGCGTGTGAGTACCACCTCGACATCACCGGCCGT AGGATCTCCCTCGAAACCGCCACGGCCATCGGGGCTGTTACCGCCGTTATCGGGCACTTGATCAAGAAGGAACTCGGAGA GTGA
Upstream 100 bases:
>100_bases GTAGTGCTCAAACGCACGGCGACTCGCCACCGTCTTCCCGAACCTATCCGGGTCGCCCACTTCATCGCCACCGGAGTGAC CAAGGGGGAATCTTCCAGCG
Downstream 100 bases:
>100_bases GCAGCAGGTGAGTGCTCCCACCGACGGAGCTACCGTTATGGTTTTCATAACGATTTGGGCCTTGGTGGGCCCGCCGGGAT TTGAACCCGGGTCACGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLV LAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGR RISLETATAIGAVTAVIGHLIKKELGE
Sequences:
>Translated_187_residues MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLV LAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGR RISLETATAIGAVTAVIGHLIKKELGE >Mature_186_residues PKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHELAEYVAEETTIGASGREVLVL AERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPEDVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRR ISLETATAIGAVTAVIGHLIKKELGE
Specific function: Unknown
COG id: COG1772
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007501 [H]
Pfam domain/function: PF04407 DUF531 [H]
EC number: NA
Molecular weight: Translated: 20677; Mature: 20546
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHE CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCHHHCCCCCHHH LAEYVAEETTIGASGREVLVLAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPE HHHHHHHHCCCCCCCCEEEEEECCCEEEHHCCCCCCCCCCHHHEECCCCCCCCCCCCCHH DVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRRISLETATAIGAVTAVIGHL HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH IKKELGE HHHHHCC >Mature Secondary Structure PKRAGRVTIGLYNSYDPRRFHEIHARTIARAAPLCVAFDFKLALFGFPLDDLGVETPHE CCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEEEHHHCCCCHHHCCCCCHHH LAEYVAEETTIGASGREVLVLAERNLLEVYDYPVRGFPPQLGTIVGTTCRPDERKAIEPE HHHHHHHHCCCCCCCCEEEEEECCCEEEHHCCCCCCCCCCHHHEECCCCCCCCCCCCCHH DVVREILRPRSVTLVFGLGRRGLPAEVLEACEYHLDITGRRISLETATAIGAVTAVIGHL HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHH IKKELGE HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]