| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20093454
Identifier: 20093454
GI number: 20093454
Start: 13791
End: 14549
Strand: Direct
Name: 20093454
Synonym: MK0014
Alternate gene names: NA
Gene position: 13791-14549 (Clockwise)
Preceding gene: 20093453
Following gene: 20093455
Centisome position: 0.81
GC content: 59.68
Gene sequence:
>759_bases TTGAAGGAACCGGAACCGGGAATAACCGATCTCACGGAGACCGTCCGGTCACGTCCGTTCTGGGACGTCGTCAAGGAGAT CGGGTTAGCTAAAGCCGAGGAAATCGCTGAAGTTGTTCCGGAAGGTTCCCGGATCCTCGTGTTGGGAGCATATCTGACAG GAATCTTCGTGGCGGAGCTCCTCTCGGAGGAGCACGAAATCACCGTCCTAGATCCCGAACCCGCGCTTCGGAAGATCCTA CCCCCGGGTGTGAGGTTCAGGGCCAGTCGAGTACCTCCTCCCGGCCGCTACGATGTCGTGATAGACCTAACGGGATTAGG CGGAACGAACCCCCGGGTGCTACGTAGGCTGAATCCCGAGGTACTCGTGGTAGAAAATCCCGCCGGGAACATGAACGACC CTCGAATCGAGGAGTACAACGACACCGAAGAGCGTCTGGAGGCCGGGGAAGAATCCTACGAGCTCCGGCTGTTCGACGCC CCGTTCGAGGCCAAGACTTCCGGCACGTTCACGCTCTCCGTGAGGACCGTACGTGAGGCTGCGAACAGGCTGGAGCGCCA TTACGGTGTCCTTTACGCCGTCCCGGGTGTTGTTAACCTCGAACGATGGACCTTCAGACTGAGGAGACCCGAAGAGGGGG TCGAGCGAGCTCGGGAGAAACCGGCGGTGACGGTATCGCAGCTCACCGGTTCCTCGGACCCGGACGAGGTCATCGGGGAA GTCCTTGATGAGATCCTCTTCGAAATCCGTGAGCGTTGA
Upstream 100 bases:
>100_bases GGAGATCCTGCCGAAGGCCCTAGAGGTCCTGGAGAAGTACTCGAAGAAGGCGGAGTAAGCCCCTTTACTTTCCCCCACAG TCTCTTTCCAGGGGAGCTCG
Downstream 100 bases:
>100_bases AGGCGTTCTGGAAGTTCTCGAGGGACTGGCACCGTTCGATCTAGCCGTCGAGGGAGACGAGGTGGGTCTCGTCGCGGGGG ATCCCTCCGACTCTGTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKEPEPGITDLTETVRSRPFWDVVKEIGLAKAEEIAEVVPEGSRILVLGAYLTGIFVAELLSEEHEITVLDPEPALRKIL PPGVRFRASRVPPPGRYDVVIDLTGLGGTNPRVLRRLNPEVLVVENPAGNMNDPRIEEYNDTEERLEAGEESYELRLFDA PFEAKTSGTFTLSVRTVREAANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERAREKPAVTVSQLTGSSDPDEVIGE VLDEILFEIRER
Sequences:
>Translated_252_residues MKEPEPGITDLTETVRSRPFWDVVKEIGLAKAEEIAEVVPEGSRILVLGAYLTGIFVAELLSEEHEITVLDPEPALRKIL PPGVRFRASRVPPPGRYDVVIDLTGLGGTNPRVLRRLNPEVLVVENPAGNMNDPRIEEYNDTEERLEAGEESYELRLFDA PFEAKTSGTFTLSVRTVREAANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERAREKPAVTVSQLTGSSDPDEVIGE VLDEILFEIRER >Mature_252_residues MKEPEPGITDLTETVRSRPFWDVVKEIGLAKAEEIAEVVPEGSRILVLGAYLTGIFVAELLSEEHEITVLDPEPALRKIL PPGVRFRASRVPPPGRYDVVIDLTGLGGTNPRVLRRLNPEVLVVENPAGNMNDPRIEEYNDTEERLEAGEESYELRLFDA PFEAKTSGTFTLSVRTVREAANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERAREKPAVTVSQLTGSSDPDEVIGE VLDEILFEIRER
Specific function: Unknown
COG id: COG4017
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009573 [H]
Pfam domain/function: PF06690 DUF1188 [H]
EC number: NA
Molecular weight: Translated: 28339; Mature: 28339
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEPEPGITDLTETVRSRPFWDVVKEIGLAKAEEIAEVVPEGSRILVLGAYLTGIFVAEL CCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LSEEHEITVLDPEPALRKILPPGVRFRASRVPPPGRYDVVIDLTGLGGTNPRVLRRLNPE HCCCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC VLVVENPAGNMNDPRIEEYNDTEERLEAGEESYELRLFDAPFEAKTSGTFTLSVRTVREA EEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH ANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERAREKPAVTVSQLTGSSDPDEVIGE HHHHHHHCCEEEECCCCEEHHHHHEEECCCHHHHHHHHHCCCEEEEHHCCCCCHHHHHHH VLDEILFEIRER HHHHHHHHHHCC >Mature Secondary Structure MKEPEPGITDLTETVRSRPFWDVVKEIGLAKAEEIAEVVPEGSRILVLGAYLTGIFVAEL CCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCCCEEEEEHHHHHHHHHHHH LSEEHEITVLDPEPALRKILPPGVRFRASRVPPPGRYDVVIDLTGLGGTNPRVLRRLNPE HCCCCCEEEECCCHHHHHHCCCCCCEEECCCCCCCCEEEEEEEECCCCCCHHHHHHCCCC VLVVENPAGNMNDPRIEEYNDTEERLEAGEESYELRLFDAPFEAKTSGTFTLSVRTVREA EEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEEHHHHHHH ANRLERHYGVLYAVPGVVNLERWTFRLRRPEEGVERAREKPAVTVSQLTGSSDPDEVIGE HHHHHHHCCEEEECCCCEEHHHHHEEECCCHHHHHHHHHCCCEEEEHHCCCCCHHHHHHH VLDEILFEIRER HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]