Click here to switch to the map view.

The map label for this gene is 20093450

Identifier: 20093450

GI number: 20093450

Start: 10400

End: 11074

Strand: Reverse

Name: 20093450

Synonym: MK0010

Alternate gene names: NA

Gene position: 11074-10400 (Counterclockwise)

Preceding gene: 20093452

Following gene: 20093447

Centisome position: 0.65

GC content: 61.04

Gene sequence:

>675_bases
GTGGAACCGGACGAACTCATCGAGGAGCTCGAGCTCCGCAAGCGTCCCCGCGGCACCGTTCTTTTGTGCGGCATAGGCAG
GCTCGGTTTCCGCGTATTCTTGAGATTGCTCGAAACTCATCGAGGAGGTCCCAAGAGGATCGTATGCGTCGACGGCCAGA
GGGTCGAGCCGGATGATATCATACACCTAAGACATGGAGCTAGAATTGGGGAGAACAAGGCGGAGTTCGCCGCGCGACTG
GGGCGTGTTCATCCCCTCAGGGAGGTCCATGCGGAGCCCGAGTTCGTGACTGAAGAAAACGCCTCCGAACTAGTCGACAC
GTGGGAACCGGACGTAGTCGTGATTACTATCGCTGGAGGTCGTACGACCCCGGTTACCGCCGCCCTGGCTCGAGAAGCAC
GGCGGTTCGGAGCAGTTACCGTGAGCACCGGAGGGGTGTTCGGATACGGCAGTGAGGAGGTGCGAGTCGTACAGCTCGAG
GAGGCCGAAGGGCCCGTGGCGAGGGAGCTCAGGGAGTACGGGGCACCATCCGATCACGTGTTGGTTACGACCGGGCGGTA
CATCCGGGATCCGGACCCTATCCCACCGATGGTGCTAGAACGCGTTGCGGATGAGCTGACCGAGCTAGCCTTGAGAGCTC
TGTCGAACCCGTCTCGGGGTGACGACGATTCCTAA

Upstream 100 bases:

>100_bases
ACGGTCATCGGTGTCTCCCCCATCCGTCGGTTCCCTCACGATCTTATTACTAAGACGTCTCGATTGCATACCAAAACGAT
TATTATGGGGGATCAGACGC

Downstream 100 bases:

>100_bases
TATCGCTGCGATCAAAACTCCCGTGACCACCGGGAAAGGCACCGGTGGTATGCCCACCGAGAAGGATCCCGTGGCTTGAA
CGTCCACGGCTGAAGCCTCG

Product: ThiF/HesA family dinucleotide-utilizing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MEPDELIEELELRKRPRGTVLLCGIGRLGFRVFLRLLETHRGGPKRIVCVDGQRVEPDDIIHLRHGARIGENKAEFAARL
GRVHPLREVHAEPEFVTEENASELVDTWEPDVVVITIAGGRTTPVTAALAREARRFGAVTVSTGGVFGYGSEEVRVVQLE
EAEGPVARELREYGAPSDHVLVTTGRYIRDPDPIPPMVLERVADELTELALRALSNPSRGDDDS

Sequences:

>Translated_224_residues
MEPDELIEELELRKRPRGTVLLCGIGRLGFRVFLRLLETHRGGPKRIVCVDGQRVEPDDIIHLRHGARIGENKAEFAARL
GRVHPLREVHAEPEFVTEENASELVDTWEPDVVVITIAGGRTTPVTAALAREARRFGAVTVSTGGVFGYGSEEVRVVQLE
EAEGPVARELREYGAPSDHVLVTTGRYIRDPDPIPPMVLERVADELTELALRALSNPSRGDDDS
>Mature_224_residues
MEPDELIEELELRKRPRGTVLLCGIGRLGFRVFLRLLETHRGGPKRIVCVDGQRVEPDDIIHLRHGARIGENKAEFAARL
GRVHPLREVHAEPEFVTEENASELVDTWEPDVVVITIAGGRTTPVTAALAREARRFGAVTVSTGGVFGYGSEEVRVVQLE
EAEGPVARELREYGAPSDHVLVTTGRYIRDPDPIPPMVLERVADELTELALRALSNPSRGDDDS

Specific function: Unknown

COG id: COG4015

COG function: function code R; Predicted dinucleotide-utilizing enzyme of the ThiF/HesA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594
- InterPro:   IPR012028 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 24753; Mature: 24753

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPDELIEELELRKRPRGTVLLCGIGRLGFRVFLRLLETHRGGPKRIVCVDGQRVEPDDI
CCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHE
IHLRHGARIGENKAEFAARLGRVHPLREVHAEPEFVTEENASELVDTWEPDVVVITIAGG
EEECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCEECCCCHHHHHHCCCCCEEEEEEECC
RTTPVTAALAREARRFGAVTVSTGGVFGYGSEEVRVVQLEEAEGPVARELREYGAPSDHV
CCCHHHHHHHHHHHHHCCEEEECCCEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE
LVTTGRYIRDPDPIPPMVLERVADELTELALRALSNPSRGDDDS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MEPDELIEELELRKRPRGTVLLCGIGRLGFRVFLRLLETHRGGPKRIVCVDGQRVEPDDI
CCHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHE
IHLRHGARIGENKAEFAARLGRVHPLREVHAEPEFVTEENASELVDTWEPDVVVITIAGG
EEECCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCEECCCCHHHHHHCCCCCEEEEEEECC
RTTPVTAALAREARRFGAVTVSTGGVFGYGSEEVRVVQLEEAEGPVARELREYGAPSDHV
CCCHHHHHHHHHHHHHCCEEEECCCEECCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCE
LVTTGRYIRDPDPIPPMVLERVADELTELALRALSNPSRGDDDS
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]