Click here to switch to the map view.

The map label for this gene is ymfF [H]

Identifier: 19747031

GI number: 19747031

Start: 1873556

End: 1874800

Strand: Reverse

Name: ymfF [H]

Synonym: spyM18_2234

Alternate gene names: 19747031

Gene position: 1874800-1873556 (Counterclockwise)

Preceding gene: 19747037

Following gene: 19747030

Centisome position: 98.93

GC content: 30.2

Gene sequence:

>1245_bases
ATGAAAATTGTTCAGGGAGTACAACTTCATCTGATTAAGACCAAACAGTTTAAAACCAATCATATTACCTTTCGTTTTTC
AGGTGATTTGAACCAAAAAACAGTAGCAAAAAGAGTCTTAGTGGCACAGATGTTAGCAACAGCTAATGAGTGTTATCCAA
CTGTTAGGCAGTTTAGAGAAAAATTAGCACGACTTTATGGAGCTAGCTTGTCAACTAACGTGTTAACAAAAGGGTTAGTT
CATATTGTGGATATCGATATTACTTTTATTCAAGATAGATATGCTTGCAATGGGGAAAAAATACTAGATGAAATGATTCA
GTTTTTAAAAGATATCTTGTTCTCACCCCTATTATCCATCGCTCAGTATCAGCCTAAAGTTTTTGAGACTGAAAAAAATA
ATTTGATTAACTACATCGAGTCAGATAGAGAGGATTCTTTTTACTACAGCTCTCTTAAGGTAAAAGAATTGTTTTATTGT
AATAAGAATCTACAAATGTCAGAATATGGTAGTCCAGAACTAATTGCAAAAGAGACTGCCTATACTAGCTATCAAGAATT
TCATAAAATGCTCAATGAAGATCAGATTGATATTTTCATTTTAGGAGATTTTGATGATTATCGCGTTGTTCAGCTAATTC
ATCAATTTCCACTTGATAACCGAAATAAAAACCTAAATTTCTTTCATTTACAAAATTCTGTCAATATTATTAAAGAATCT
ATTGAAAAAAGAGCAGTTCATCAATCTATTTTACAATTAGCTTATCACTTTCCTTCAGTTTTTGGACAACGTGACTATTA
TGCTTTAGTTTTTTTAAATGGGTTGTTAGGCTCTTTTGCACATTCCCGTCTCTTTATAAAAATTAGAGAAGAAGAAGGAC
TTGCTTATAGTATAGGGTGTCGTTTTGATAGTTATACAGGTTTATTTGAAATTTATACTGGAATTGACAGTCAACATCGC
ACTAAAACGTTACAACTAATCATCCAAGAAATAAATGCCATTAAAATGGGACGATTCTCAGAACAATTGATTAAAAAGAC
CAGGTCGATGTTGTTGAATAATGCCTTATTATCAGAAGATTATAATAAAAATATAATTGAAAGAATATACACATCTTCTT
ACATTGATTCTTCTTATTCTATTAAAAATTGGATTAAAGGGGTTAATGAAGTTAATAAAGTAGATATCATTAAAGTAGCT
AATCTTTTAAAGCTTCAAACTGTCTATTTTTTAGAAGGAATATAA

Upstream 100 bases:

>100_bases
ACTAAAATCCCGACAATTAAGTCAAAAAAAGTTATCACTCACCTAACCTGAATAAAAATGGTATAATCGTAAGGATCACA
CTATTTATTAAGGAAACATT

Downstream 100 bases:

>100_bases
AATGACAAAATTAGTAAAGATAAACTATCCTAATATTGACGAAGACCTTTACTATGTAAAATTAGAAAATGGTTTAACTG
TTTATTTTATAAAAAAAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVFLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQEINAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYTSSYIDSSYSIKNWIKGVNEVNKVDIIKVA
NLLKLQTVYFLEGI

Sequences:

>Translated_414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVFLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQEINAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYTSSYIDSSYSIKNWIKGVNEVNKVDIIKVA
NLLKLQTVYFLEGI
>Mature_414_residues
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFREKLARLYGASLSTNVLTKGLV
HIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSIAQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYC
NKNLQMSEYGSPELIAKETAYTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
IEKRAVHQSILQLAYHFPSVFGQRDYYALVFLNGLLGSFAHSRLFIKIREEEGLAYSIGCRFDSYTGLFEIYTGIDSQHR
TKTLQLIIQEINAIKMGRFSEQLIKKTRSMLLNNALLSEDYNKNIIERIYTSSYIDSSYSIKNWIKGVNEVNKVDIIKVA
NLLKLQTVYFLEGI

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 48243; Mature: 48243

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFRE
CCCCCCCEEEEEEECEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLARLYGASLSTNVLTKGLVHIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSI
HHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYCNKNLQMSEYGSPELIAKETA
HHCCCCCEECCCHHHHHHHHCCCCCCEEEHHEEHHHHEEECCCCEECCCCCCCCEEHHHH
YTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
IEKRAVHQSILQLAYHFPSVFGQRDYYALVFLNGLLGSFAHSRLFIKIREEEGLAYSIGC
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEC
RFDSYTGLFEIYTGIDSQHRTKTLQLIIQEINAIKMGRFSEQLIKKTRSMLLNNALLSED
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
YNKNIIERIYTSSYIDSSYSIKNWIKGVNEVNKVDIIKVANLLKLQTVYFLEGI
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIVQGVQLHLIKTKQFKTNHITFRFSGDLNQKTVAKRVLVAQMLATANECYPTVRQFRE
CCCCCCCEEEEEEECEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLARLYGASLSTNVLTKGLVHIVDIDITFIQDRYACNGEKILDEMIQFLKDILFSPLLSI
HHHHHHCCCCHHHHHHHCCEEEEEEEEEEECCHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQYQPKVFETEKNNLINYIESDREDSFYYSSLKVKELFYCNKNLQMSEYGSPELIAKETA
HHCCCCCEECCCHHHHHHHHCCCCCCEEEHHEEHHHHEEECCCCEECCCCCCCCEEHHHH
YTSYQEFHKMLNEDQIDIFILGDFDDYRVVQLIHQFPLDNRNKNLNFFHLQNSVNIIKES
HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH
IEKRAVHQSILQLAYHFPSVFGQRDYYALVFLNGLLGSFAHSRLFIKIREEEGLAYSIGC
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEEC
RFDSYTGLFEIYTGIDSQHRTKTLQLIIQEINAIKMGRFSEQLIKKTRSMLLNNALLSED
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCC
YNKNIIERIYTSSYIDSSYSIKNWIKGVNEVNKVDIIKVANLLKLQTVYFLEGI
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]