Click here to switch to the map view.

The map label for this gene is 19746597

Identifier: 19746597

GI number: 19746597

Start: 1413371

End: 1413823

Strand: Reverse

Name: 19746597

Synonym: spyM18_1698

Alternate gene names: NA

Gene position: 1413823-1413371 (Counterclockwise)

Preceding gene: 19746598

Following gene: 19746596

Centisome position: 74.61

GC content: 35.32

Gene sequence:

>453_bases
ATGATACTTCAAAGTGACCACACGTTTTTATATTGTATAGTCAAAGTATTGGGAAAAACCATGTGTTTGAGTTATAATAG
AAGAAATCAAAGAAAGAAGGTAGTACTTATGACAATTAAAAAATTCTCTCTACTAGCCATAGCCAGTCTCTCTTTACTCA
GTCTTGCAGCCTGTGATATGGATGATAAAGACGATCATATGGATAATCAGCCAAAGACAAGTCAAACTAGCAAGAAAGTT
AAACTTTCAGAAGACAAAGCCAAATCAATTGCGTTAAAAGATGCTTCTGTTACGGAAGCTGATGCTCAAATGCTATCAGT
TACACAAGATAATGAAGATGGCAAAGCCGTGTATGAAATCGAGTTTCAAAACAAAGATCAAGAATACAGCTATACCATTG
ACGCCAACTCAGGGGATATTGTGGAAAAATCTTCTGAACCAATCAATGACTAA

Upstream 100 bases:

>100_bases
GCACGGCCGTTCATTAGATGACCCAAAATCATAAGACAAAAAGCAGCTCTGAACTGCTTTTTGTTTATCGTGATGACTGT
TAGCTTTTATTTTAAATGGT

Downstream 100 bases:

>100_bases
TCAAGAACTGTAATGAATAAGACAGCCTTAGCTCTTGTGTCCAATTGTCTTTGCCTCTTAGGCACGGCTGTTTGATACCG
TGTTGCCTTTGAGGCTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MILQSDHTFLYCIVKVLGKTMCLSYNRRNQRKKVVLMTIKKFSLLAIASLSLLSLAACDMDDKDDHMDNQPKTSQTSKKV
KLSEDKAKSIALKDASVTEADAQMLSVTQDNEDGKAVYEIEFQNKDQEYSYTIDANSGDIVEKSSEPIND

Sequences:

>Translated_150_residues
MILQSDHTFLYCIVKVLGKTMCLSYNRRNQRKKVVLMTIKKFSLLAIASLSLLSLAACDMDDKDDHMDNQPKTSQTSKKV
KLSEDKAKSIALKDASVTEADAQMLSVTQDNEDGKAVYEIEFQNKDQEYSYTIDANSGDIVEKSSEPIND
>Mature_150_residues
MILQSDHTFLYCIVKVLGKTMCLSYNRRNQRKKVVLMTIKKFSLLAIASLSLLSLAACDMDDKDDHMDNQPKTSQTSKKV
KLSEDKAKSIALKDASVTEADAQMLSVTQDNEDGKAVYEIEFQNKDQEYSYTIDANSGDIVEKSSEPIND

Specific function: Unknown

COG id: COG3212

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015801
- InterPro:   IPR005075 [H]

Pfam domain/function: PF03413 PepSY [H]

EC number: NA

Molecular weight: Translated: 16836; Mature: 16836

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQSDHTFLYCIVKVLGKTMCLSYNRRNQRKKVVLMTIKKFSLLAIASLSLLSLAACDM
CEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCC
DDKDDHMDNQPKTSQTSKKVKLSEDKAKSIALKDASVTEADAQMLSVTQDNEDGKAVYEI
CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHEEEEECCCCCCCEEEEE
EFQNKDQEYSYTIDANSGDIVEKSSEPIND
EECCCCCCEEEEEECCCCCEEECCCCCCCC
>Mature Secondary Structure
MILQSDHTFLYCIVKVLGKTMCLSYNRRNQRKKVVLMTIKKFSLLAIASLSLLSLAACDM
CEECCCCHHHHHHHHHHHHHHEECCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCC
DDKDDHMDNQPKTSQTSKKVKLSEDKAKSIALKDASVTEADAQMLSVTQDNEDGKAVYEI
CCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCHHHHHEEEEECCCCCCCEEEEE
EFQNKDQEYSYTIDANSGDIVEKSSEPIND
EECCCCCCEEEEEECCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA