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The map label for this gene is sodA [H]

Identifier: 19746368

GI number: 19746368

Start: 1182610

End: 1183215

Strand: Reverse

Name: sodA [H]

Synonym: spyM18_1414

Alternate gene names: 19746368

Gene position: 1183215-1182610 (Counterclockwise)

Preceding gene: 19746369

Following gene: 19746367

Centisome position: 62.44

GC content: 39.77

Gene sequence:

>606_bases
ATGGCTATTATTTTACCAGAACTTCCATACGCGTATGATGCTCTTGAACCACAGTTTGATGCGGAGACAATGTCTCTTCA
TCATGATAAACACCATGCCACTTATGTCGCTAATACCAATGCGGCTTTAGAAAAACACCCAGAGATCGGAGAAAATCTGG
AGGAACTATTGGCAGATGTCACTAAGATTCCAGAAGATATTCGTCAAGCCTTAATTAATAATGGTGGCGGACACCTAAAC
CATGCGCTTTTCTGGGAACTATTATCACCTGAAAAACAAGACGTCACTCCTGATGTTGCACAAGCCATTGATGATGCTTT
TGGGTCATTTGACGCCTTTAAAGAACAATTTACAGCAGCTGCTACTGGACGTTTTGGTTCGGGTTGGGCATGGTTAGTTG
TTAATAAAGAAGGACAACTCGAAATCACATCAACCGCTAACCAAGATACTCCAATTTCAGAAGGCAAAAAACCAATTCTA
GCGCTTGATGTGTGGGAGCATGCTTACTACTTGAATTATCGTAATGTACGTCCAAATTATATCAAAGCTTTCTTTGAAAT
CATTAATTGGAAAAAAGTATCAGAACTTTACCAAGCCGCTAAATAA

Upstream 100 bases:

>100_bases
ATAGGCATTGGACCGCTTTCCAAGAGATAATCAAATTAGTTGAAAGCTCTTATTTTTTGCGATAAGATAGACGTATCATA
AAGGAAAAGAGGACAGGAAA

Downstream 100 bases:

>100_bases
GAAAAGGGTTTCCAATCTCAAAAAGAGATTGGTTTTTTAAGTGCTTTTGTGAATAACAGTGTGGGGACATCATTTTTTAG
AAAAGATGAAAATAGTTCGT

Product: superoxide dismutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAIILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADVTKIPEDIRQALINNGGGHLN
HALFWELLSPEKQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKEGQLEITSTANQDTPISEGKKPIL
ALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQAAK

Sequences:

>Translated_201_residues
MAIILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADVTKIPEDIRQALINNGGGHLN
HALFWELLSPEKQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKEGQLEITSTANQDTPISEGKKPIL
ALDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQAAK
>Mature_200_residues
AIILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADVTKIPEDIRQALINNGGGHLNH
ALFWELLSPEKQDVTPDVAQAIDDAFGSFDAFKEQFTAAATGRFGSGWAWLVVNKEGQLEITSTANQDTPISEGKKPILA
LDVWEHAYYLNYRNVRPNYIKAFFEIINWKKVSELYQAAK

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=203, Percent_Identity=50.7389162561576, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI67782305, Length=203, Percent_Identity=50.7389162561576, Blast_Score=187, Evalue=4e-48,
Organism=Homo sapiens, GI67782309, Length=200, Percent_Identity=44.5, Blast_Score=151, Evalue=3e-37,
Organism=Escherichia coli, GI1790342, Length=208, Percent_Identity=50, Blast_Score=207, Evalue=4e-55,
Organism=Escherichia coli, GI1787946, Length=196, Percent_Identity=44.3877551020408, Blast_Score=175, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI17506561, Length=202, Percent_Identity=43.5643564356436, Blast_Score=165, Evalue=2e-41,
Organism=Caenorhabditis elegans, GI17569479, Length=200, Percent_Identity=43, Blast_Score=160, Evalue=5e-40,
Organism=Saccharomyces cerevisiae, GI6321796, Length=207, Percent_Identity=39.6135265700483, Blast_Score=144, Evalue=1e-35,
Organism=Drosophila melanogaster, GI17136812, Length=200, Percent_Identity=46, Blast_Score=173, Evalue=7e-44,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 22654; Mature: 22522

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADV
CEEEECCCCCHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHH
TKIPEDIRQALINNGGGHLNHALFWELLSPEKQDVTPDVAQAIDDAFGSFDAFKEQFTAA
HHCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ATGRFGSGWAWLVVNKEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNY
HCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHEEEEECCCCCHHH
IKAFFEIINWKKVSELYQAAK
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AIILPELPYAYDALEPQFDAETMSLHHDKHHATYVANTNAALEKHPEIGENLEELLADV
EEEECCCCCHHHCCCCCCCCHHHHHHCCCCCEEEEECCCCHHHCCCCCCHHHHHHHHHH
TKIPEDIRQALINNGGGHLNHALFWELLSPEKQDVTPDVAQAIDDAFGSFDAFKEQFTAA
HHCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHH
ATGRFGSGWAWLVVNKEGQLEITSTANQDTPISEGKKPILALDVWEHAYYLNYRNVRPNY
HCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHEEEEECCCCCHHH
IKAFFEIINWKKVSELYQAAK
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]