Click here to switch to the map view.

The map label for this gene is 19746191

Identifier: 19746191

GI number: 19746191

Start: 1017580

End: 1018119

Strand: Reverse

Name: 19746191

Synonym: spyM18_1213

Alternate gene names: NA

Gene position: 1018119-1017580 (Counterclockwise)

Preceding gene: 19746192

Following gene: 19746190

Centisome position: 53.73

GC content: 34.07

Gene sequence:

>540_bases
ATGACTGAAACTTATATTAAAAACACATCTAAAGACTTAACTTCAGCAATTCGTGGTCAATTAACATATGATGATAAAGT
AATTGAAAAAATTGTTGGTTTAGCACTTGAAAATGTCGATGGGTTACTGGGTGTAAATGGTGGTTTTTTTGCTAACCTAA
AAGATAAATTAGTAAACACCGAATCTGTACGTGATGGCGTGAACGTGGAAGTTGGAAAAAAACAAGTTGCCGTTGATCTT
GATATTGTCGCTGAATATCAAAAGCATGTGCCGACTATTTATGACTCTATTAAATCGATCGTTGAAGAAGAAGTGAAGAG
AATGACCGATCTGGATGTGATTGAAGTTAATGTTAAAGTAGTCGACATTAAAACAAAAGAACAATTTGAAGCTGAAAAAG
TAAGTTTACAAGACAAAGTTTCAGACATGGCACGTTCAACATCTGAATTTACGAGTCATCAAGTTGAGAATGTTAAAGCT
TCAGTGGATAACGGTGTTGAAAAACTTCAAGATCAAAAAGCTGAGCCACGTGTAAAATAA

Upstream 100 bases:

>100_bases
AGCAATTATTTTCATTATTTTAGGAATATATGGTGGCCTGTATGCCAAAAAAACAGGTATTATTGATCAATTTCTTAATC
GCAAATAAAGGAGACTTATT

Downstream 100 bases:

>100_bases
TTATATGTCGTCAATTAGGTAAGCTAAAGGAGGGTTTATTGTGTCAGATGAAAAATATAATGCGAAATTAGATCAAGCTG
GTGGCAAGTTAAAAGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MTETYIKNTSKDLTSAIRGQLTYDDKVIEKIVGLALENVDGLLGVNGGFFANLKDKLVNTESVRDGVNVEVGKKQVAVDL
DIVAEYQKHVPTIYDSIKSIVEEEVKRMTDLDVIEVNVKVVDIKTKEQFEAEKVSLQDKVSDMARSTSEFTSHQVENVKA
SVDNGVEKLQDQKAEPRVK

Sequences:

>Translated_179_residues
MTETYIKNTSKDLTSAIRGQLTYDDKVIEKIVGLALENVDGLLGVNGGFFANLKDKLVNTESVRDGVNVEVGKKQVAVDL
DIVAEYQKHVPTIYDSIKSIVEEEVKRMTDLDVIEVNVKVVDIKTKEQFEAEKVSLQDKVSDMARSTSEFTSHQVENVKA
SVDNGVEKLQDQKAEPRVK
>Mature_178_residues
TETYIKNTSKDLTSAIRGQLTYDDKVIEKIVGLALENVDGLLGVNGGFFANLKDKLVNTESVRDGVNVEVGKKQVAVDLD
IVAEYQKHVPTIYDSIKSIVEEEVKRMTDLDVIEVNVKVVDIKTKEQFEAEKVSLQDKVSDMARSTSEFTSHQVENVKAS
VDNGVEKLQDQKAEPRVK

Specific function: Unknown

COG id: COG1302

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the asp23 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLS24_STRP1 (Q99ZE5)

Other databases:

- EMBL:   AE004092
- EMBL:   CP000017
- RefSeq:   NP_269395.1
- RefSeq:   YP_282336.1
- ProteinModelPortal:   Q99ZE5
- EnsemblBacteria:   EBSTRT00000000369
- EnsemblBacteria:   EBSTRT00000027399
- GeneID:   3571948
- GeneID:   901361
- GenomeReviews:   AE004092_GR
- GenomeReviews:   CP000017_GR
- KEGG:   spy:SPy_1262
- KEGG:   spz:M5005_Spy_0973
- GeneTree:   EBGT00050000027233
- HOGENOM:   HBG477019
- OMA:   AVDLDII
- ProtClustDB:   CLSK876856
- BioCyc:   SPYO160490:SPY1262-MONOMER
- BioCyc:   SPYO293653:M5005_SPY0973-MONOMER
- InterPro:   IPR005531

Pfam domain/function: PF03780 DUF322

EC number: NA

Molecular weight: Translated: 19944; Mature: 19813

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00867 CPSASE_2 ; PS00327 BACTERIAL_OPSIN_RET

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETYIKNTSKDLTSAIRGQLTYDDKVIEKIVGLALENVDGLLGVNGGFFANLKDKLVNT
CCCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHCCH
ESVRDGVNVEVGKKQVAVDLDIVAEYQKHVPTIYDSIKSIVEEEVKRMTDLDVIEVNVKV
HHHHCCCCEEECCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VDIKTKEQFEAEKVSLQDKVSDMARSTSEFTSHQVENVKASVDNGVEKLQDQKAEPRVK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TETYIKNTSKDLTSAIRGQLTYDDKVIEKIVGLALENVDGLLGVNGGFFANLKDKLVNT
CCCHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCEEECHHHHHCCH
ESVRDGVNVEVGKKQVAVDLDIVAEYQKHVPTIYDSIKSIVEEEVKRMTDLDVIEVNVKV
HHHHCCCCEEECCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEE
VDIKTKEQFEAEKVSLQDKVSDMARSTSEFTSHQVENVKASVDNGVEKLQDQKAEPRVK
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296