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The map label for this gene is 19746190

Identifier: 19746190

GI number: 19746190

Start: 1017339

End: 1017539

Strand: Reverse

Name: 19746190

Synonym: spyM18_1212

Alternate gene names: NA

Gene position: 1017539-1017339 (Counterclockwise)

Preceding gene: 19746191

Following gene: 19746189

Centisome position: 53.7

GC content: 30.85

Gene sequence:

>201_bases
GTGTCAGATGAAAAATATAATGCGAAATTAGATCAAGCTGGTGGCAAGTTAAAAGAAGGATTTGGTAAGATTTCTGGAGA
TAAATCTTTAGAAACTGAAGGTAAAGTAGATAAAGTTACTGGAAAAGTTAAAGAGGTTATTGTAGACGCCAAAGATACTG
TAAAAGGATTAGCTAAAGGCTTAGATAATAAAGATAAATAA

Upstream 100 bases:

>100_bases
TCAGTGGATAACGGTGTTGAAAAACTTCAAGATCAAAAAGCTGAGCCACGTGTAAAATAATTATATGTCGTCAATTAGGT
AAGCTAAAGGAGGGTTTATT

Downstream 100 bases:

>100_bases
AGGGGACATGATGGAAAAAACTCAAATTAAAAGCACTCTTACTTATGACGATAAGGTCATCGAAAAAATTGTCGGTCATG
CTTTGGAAAACGTTGGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 65

Protein sequence:

>66_residues
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKGLDNKDK

Sequences:

>Translated_66_residues
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKGLDNKDK
>Mature_65_residues
SDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKGLDNKDK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1212_STRP8 (Q8P0T7)

Other databases:

- EMBL:   AE009949
- RefSeq:   NP_607326.1
- ProteinModelPortal:   Q8P0T7
- SMR:   Q8P0T7
- EnsemblBacteria:   EBSTRT00000029331
- GeneID:   994784
- GenomeReviews:   AE009949_GR
- KEGG:   spm:spyM18_1212
- GeneTree:   EBGT00050000027792
- HOGENOM:   HBG704474
- OMA:   RYCKRIS
- ProtClustDB:   CLSK698658
- BioCyc:   SPYO186103:SPYM18_1212-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 7054; Mature: 6923

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKG
CCCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC
LDNKDK
CCCCCC
>Mature Secondary Structure 
SDEKYNAKLDQAGGKLKEGFGKISGDKSLETEGKVDKVTGKVKEVIVDAKDTVKGLAKG
CCCCCCCHHHHCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHC
LDNKDK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11917108