Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is dnaI [H]

Identifier: 197294835

GI number: 197294835

Start: 846475

End: 847299

Strand: Reverse

Name: dnaI [H]

Synonym: PAa_0821

Alternate gene names: 197294835

Gene position: 847299-846475 (Counterclockwise)

Preceding gene: 197294836

Following gene: 197294832

Centisome position: 96.29

GC content: 25.58

Gene sequence:

>825_bases
ATGTCTTTATCAGATATCAAAAAAGAAATAAGAAAAAAACTTGCTCAAAATCCAGAAACAAAAGATCTTAAAATTGATGA
TGATGATTTATTAACTTATTATAATTATTATAAAAACAAAACAAAAGAACATCAAAATGAAACATTTTTTCGTCCAGAGT
TAAAAAAAAAGCCCTTTCCAAGGGTTGTTTTGGTTCCTACTGTGCAATCTAACAAAATGCAATTCCAAGAAAATTGTAAA
AAAATAAATGCTTTATTTGATAGTGAGCTGGAATTAGAGCAATATTCTTTAAGCAAATTAATAGTTGATAGCGAAATTAA
AAAACAAGTTTATAAAGAAATGCAAAAAGTTATCAAAAACTTTAATAAAGTAAACAAGGGTTTTTATCTTTGTGGTTCTT
TTAAAACAGGTAAAACGTTTTTTTTGAAAGCTCTTGCCAAACAGTTGCTTCAAAAAGAAATTTCTGTTCTATTTCTTTTT
ATGCCGAATTTAACACGTAAATTTAAAGCTCTTGTGTATAGTAATTTATTAGAAACAAGGTTTTATCAATTAAAAACAAC
TGATTGTTTATTTTTAGATGACTTAGGCGCTGAAAACATTAACCCTTGGTTTCGCGATGAGATTTTATTACCTCTTTTGT
ATTATCGTGCAGAAAGGAAACTCCCTGTTTTTATTAGTAGTAATTATAATTTTTTGCAATTGGATAAACATTTAATAGGC
AATGTTGCTTATAATGATAATAGTTATGTTAAAATCCATAAAATTATTGATAAAATTAACGAATTAACGAAATTTTATGA
TTTTTCCAAAAAAGAAACTTCCTAG

Upstream 100 bases:

>100_bases
ATGACAAAAAAATAATTAATATTTTTTTACAGTTATTTTATTTATTATAAAAATAAAGATAAAAATAATTCTAAACAAGA
ATTATAAAGGAGAAGTTTTA

Downstream 100 bases:

>100_bases
AAAAATTCTCTTTGGGAAAAATAATTACTATGTTTTTTTTGGTGGAGATGATGGGAATCGAACCCATGTGCAAGGCCATT
TTAGTTTATAAATTCTACAT

Product: Putative DNA replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCK
KINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLF
MPNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG
NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS

Sequences:

>Translated_274_residues
MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCK
KINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLF
MPNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG
NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS
>Mature_273_residues
SLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCKK
INALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFM
PNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIGN
VAYNDNSYVKIHKIIDKINELTKFYDFSKKETS

Specific function: Probably involved in DNA replication [H]

COG id: COG1484

COG function: function code L; DNA replication protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR009928
- InterPro:   IPR002611 [H]

Pfam domain/function: PF07319 DnaI_N; PF01695 IstB [H]

EC number: NA

Molecular weight: Translated: 32596; Mature: 32465

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFP
CCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC
RVVLVPTVQSNKMQFQENCKKINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKN
CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFMPNLTRKFKALVYSNLLETR
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHHHH
FYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG
HHHEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECHHHHC
NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS
EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFP
CHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC
RVVLVPTVQSNKMQFQENCKKINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKN
CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFMPNLTRKFKALVYSNLLETR
HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHHHH
FYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG
HHHEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECHHHHC
NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS
EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3027671; 8969504; 9387221; 9384377; 3027697; 1549481; 7773414 [H]