| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is dnaI [H]
Identifier: 197294835
GI number: 197294835
Start: 846475
End: 847299
Strand: Reverse
Name: dnaI [H]
Synonym: PAa_0821
Alternate gene names: 197294835
Gene position: 847299-846475 (Counterclockwise)
Preceding gene: 197294836
Following gene: 197294832
Centisome position: 96.29
GC content: 25.58
Gene sequence:
>825_bases ATGTCTTTATCAGATATCAAAAAAGAAATAAGAAAAAAACTTGCTCAAAATCCAGAAACAAAAGATCTTAAAATTGATGA TGATGATTTATTAACTTATTATAATTATTATAAAAACAAAACAAAAGAACATCAAAATGAAACATTTTTTCGTCCAGAGT TAAAAAAAAAGCCCTTTCCAAGGGTTGTTTTGGTTCCTACTGTGCAATCTAACAAAATGCAATTCCAAGAAAATTGTAAA AAAATAAATGCTTTATTTGATAGTGAGCTGGAATTAGAGCAATATTCTTTAAGCAAATTAATAGTTGATAGCGAAATTAA AAAACAAGTTTATAAAGAAATGCAAAAAGTTATCAAAAACTTTAATAAAGTAAACAAGGGTTTTTATCTTTGTGGTTCTT TTAAAACAGGTAAAACGTTTTTTTTGAAAGCTCTTGCCAAACAGTTGCTTCAAAAAGAAATTTCTGTTCTATTTCTTTTT ATGCCGAATTTAACACGTAAATTTAAAGCTCTTGTGTATAGTAATTTATTAGAAACAAGGTTTTATCAATTAAAAACAAC TGATTGTTTATTTTTAGATGACTTAGGCGCTGAAAACATTAACCCTTGGTTTCGCGATGAGATTTTATTACCTCTTTTGT ATTATCGTGCAGAAAGGAAACTCCCTGTTTTTATTAGTAGTAATTATAATTTTTTGCAATTGGATAAACATTTAATAGGC AATGTTGCTTATAATGATAATAGTTATGTTAAAATCCATAAAATTATTGATAAAATTAACGAATTAACGAAATTTTATGA TTTTTCCAAAAAAGAAACTTCCTAG
Upstream 100 bases:
>100_bases ATGACAAAAAAATAATTAATATTTTTTTACAGTTATTTTATTTATTATAAAAATAAAGATAAAAATAATTCTAAACAAGA ATTATAAAGGAGAAGTTTTA
Downstream 100 bases:
>100_bases AAAAATTCTCTTTGGGAAAAATAATTACTATGTTTTTTTTGGTGGAGATGATGGGAATCGAACCCATGTGCAAGGCCATT TTAGTTTATAAATTCTACAT
Product: Putative DNA replication protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCK KINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLF MPNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS
Sequences:
>Translated_274_residues MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCK KINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLF MPNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS >Mature_273_residues SLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFPRVVLVPTVQSNKMQFQENCKK INALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKNFNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFM PNLTRKFKALVYSNLLETRFYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIGN VAYNDNSYVKIHKIIDKINELTKFYDFSKKETS
Specific function: Probably involved in DNA replication [H]
COG id: COG1484
COG function: function code L; DNA replication protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR009928 - InterPro: IPR002611 [H]
Pfam domain/function: PF07319 DnaI_N; PF01695 IstB [H]
EC number: NA
Molecular weight: Translated: 32596; Mature: 32465
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFP CCHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC RVVLVPTVQSNKMQFQENCKKINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKN CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFMPNLTRKFKALVYSNLLETR HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHHHH FYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG HHHEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECHHHHC NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLSDIKKEIRKKLAQNPETKDLKIDDDDLLTYYNYYKNKTKEHQNETFFRPELKKKPFP CHHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC RVVLVPTVQSNKMQFQENCKKINALFDSELELEQYSLSKLIVDSEIKKQVYKEMQKVIKN CEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FNKVNKGFYLCGSFKTGKTFFLKALAKQLLQKEISVLFLFMPNLTRKFKALVYSNLLETR HHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHEEHHHHCCHHHHHHHHHHHHHHHHH FYQLKTTDCLFLDDLGAENINPWFRDEILLPLLYYRAERKLPVFISSNYNFLQLDKHLIG HHHEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECHHHHC NVAYNDNSYVKIHKIIDKINELTKFYDFSKKETS EEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3027671; 8969504; 9387221; 9384377; 3027697; 1549481; 7773414 [H]