Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is rsrIR

Identifier: 197294795

GI number: 197294795

Start: 797317

End: 798045

Strand: Reverse

Name: rsrIR

Synonym: PAa_0777

Alternate gene names: NA

Gene position: 798045-797317 (Counterclockwise)

Preceding gene: 197294796

Following gene: 197294793

Centisome position: 90.69

GC content: 26.75

Gene sequence:

>729_bases
ATGTCTAATTCAGAACAATTAAGAAAAAACATTAAACAACACAAACCTAAAAATAATAAATCTAAAAAAGATGATAAATT
AATTTATGCCGCCATGATAGATGTTAAAAATTATTTGGAATGGCGTTTTAAAGACTTTTTGGCTAACAACCCTTTTTATA
TTATCCATGAAAAACAATTATCCATTGGTTTTATGAAGGATATTATTTATAAAAAAGGTATTAGAAAAATAACTGATTAT
GAAGAGGATAAAATTTTTGATAATCGCACTATTAAACCAGATGGGGGAGTTTTGCTTTTGAAATCATATTCAGATAATGA
TTTTTGTAAGGTTTTATTGGTTTCAGAAGTGAAAAGACAAGGAACTAATGATAAATTACAAGAAGAAGGAAAACCTAAAC
AATCAAGAGGAAATGCAGTTGAAAGGTTAGGAAAAAATTTAACTGCAATTAAATCTATGTTCATGCATGAACTTATTACT
CCATTTGTTTGTTTTGGTTGGGGTTGTGATTTCAATCATGAAGATACTTTTGTTGATGCTAAAATATTTGTTTTAAACGA
ATTTTTTAAATTAAATAAGACATTTGTTTTTAAAAAATATGGAGATAATGGACATAATCGTTTTTCACCAGTTTCTATGT
ATTTTCGTGAAAATCCTTGGACACGGGAAGAAATGTTTGATTTATTAAAAGAAGTAGCCGAAACCGCTTTTAGATATTAC
TTTTTTTAG

Upstream 100 bases:

>100_bases
AAAGACGTTTTTGAAAACGTTGTTTTTCATTCAGAAATTTTAATTTTTAATGTTAATAATTTAAAACCGCATTATTTTTG
TAGAGGAACAATGATTTAAA

Downstream 100 bases:

>100_bases
GTTTTTTTTAGGTATTATAATCAATAATGAGTTTTTATAATTTTACAAAAATTTTATAAAAAATATTTCATAGCGATAGA
AAAAAAGACAGGCTTAAATA

Product: Putative restriction endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSNSEQLRKNIKQHKPKNNKSKKDDKLIYAAMIDVKNYLEWRFKDFLANNPFYIIHEKQLSIGFMKDIIYKKGIRKITDY
EEDKIFDNRTIKPDGGVLLLKSYSDNDFCKVLLVSEVKRQGTNDKLQEEGKPKQSRGNAVERLGKNLTAIKSMFMHELIT
PFVCFGWGCDFNHEDTFVDAKIFVLNEFFKLNKTFVFKKYGDNGHNRFSPVSMYFRENPWTREEMFDLLKEVAETAFRYY
FF

Sequences:

>Translated_242_residues
MSNSEQLRKNIKQHKPKNNKSKKDDKLIYAAMIDVKNYLEWRFKDFLANNPFYIIHEKQLSIGFMKDIIYKKGIRKITDY
EEDKIFDNRTIKPDGGVLLLKSYSDNDFCKVLLVSEVKRQGTNDKLQEEGKPKQSRGNAVERLGKNLTAIKSMFMHELIT
PFVCFGWGCDFNHEDTFVDAKIFVLNEFFKLNKTFVFKKYGDNGHNRFSPVSMYFRENPWTREEMFDLLKEVAETAFRYY
FF
>Mature_241_residues
SNSEQLRKNIKQHKPKNNKSKKDDKLIYAAMIDVKNYLEWRFKDFLANNPFYIIHEKQLSIGFMKDIIYKKGIRKITDYE
EDKIFDNRTIKPDGGVLLLKSYSDNDFCKVLLVSEVKRQGTNDKLQEEGKPKQSRGNAVERLGKNLTAIKSMFMHELITP
FVCFGWGCDFNHEDTFVDAKIFVLNEFFKLNKTFVFKKYGDNGHNRFSPVSMYFRENPWTREEMFDLLKEVAETAFRYYF
F

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28750; Mature: 28619

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSEQLRKNIKQHKPKNNKSKKDDKLIYAAMIDVKNYLEWRFKDFLANNPFYIIHEKQL
CCCHHHHHHHHHHCCCCCCCCCCHHHEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
SIGFMKDIIYKKGIRKITDYEEDKIFDNRTIKPDGGVLLLKSYSDNDFCKVLLVSEVKRQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
GTNDKLQEEGKPKQSRGNAVERLGKNLTAIKSMFMHELITPFVCFGWGCDFNHEDTFVDA
CCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHH
KIFVLNEFFKLNKTFVFKKYGDNGHNRFSPVSMYFRENPWTREEMFDLLKEVAETAFRYY
HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FF
CC
>Mature Secondary Structure 
SNSEQLRKNIKQHKPKNNKSKKDDKLIYAAMIDVKNYLEWRFKDFLANNPFYIIHEKQL
CCHHHHHHHHHHCCCCCCCCCCHHHEHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
SIGFMKDIIYKKGIRKITDYEEDKIFDNRTIKPDGGVLLLKSYSDNDFCKVLLVSEVKRQ
HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHC
GTNDKLQEEGKPKQSRGNAVERLGKNLTAIKSMFMHELITPFVCFGWGCDFNHEDTFVDA
CCCCHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHH
KIFVLNEFFKLNKTFVFKKYGDNGHNRFSPVSMYFRENPWTREEMFDLLKEVAETAFRYY
HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FF
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA