Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

Click here to switch to the map view.

The map label for this gene is groES [H]

Identifier: 197294780

GI number: 197294780

Start: 774690

End: 775016

Strand: Direct

Name: groES [H]

Synonym: PAa_0760

Alternate gene names: 197294780

Gene position: 774690-775016 (Clockwise)

Preceding gene: 197294779

Following gene: 197294781

Centisome position: 88.04

GC content: 28.75

Gene sequence:

>327_bases
ATGTTAAAGTGCCAAGTTTATTTTAATTTTGATATTTTAAATCTTAAAGGAGAAACTCGAATGCAAAAAACAATAACCCC
TTTGTGTGATAACATTGTTTTAAAATTAAAAATAGAAGACACCAAAACACAAAGCGGCATTCTTTTAGCTTTGTCAGAAA
AAGAAAAATCTTCTGTAGGTGTAGTTGTTGCTGTCGGCCCCAAAGTCGAAGGCCTTAAAAAAGATGATGAAGTAGTTTAT
AAAAGCTATTCTGGTAGTAAAATTAATTTACAAGAAGAAGAATATTTAATTGTATCTGTAAAAGATATTTTGGCTCAAAT
TAAGTAA

Upstream 100 bases:

>100_bases
TTAAGAACGTTTTTTTCACCTATTCCTTATTTTTTACCATCCGTATTCGCTTGACAATTGTTTTATTTTTAGATATAATA
AAATTGCTTTGGCGATTAAA

Downstream 100 bases:

>100_bases
AAATGGAATTAAGGAGTAAAATCAAATGAGTAAAAAAATCCTTTATGGCAAAGACGCAAGAAAAGCATTATTACAAGGTG
TAGATGCAATTGCAAACACT

Product: Chaperonin GroES (Hsp10)

Products: NA

Alternate protein names: GroES protein; Protein Cpn10 [H]

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLKCQVYFNFDILNLKGETRMQKTITPLCDNIVLKLKIEDTKTQSGILLALSEKEKSSVGVVVAVGPKVEGLKKDDEVVY
KSYSGSKINLQEEEYLIVSVKDILAQIK

Sequences:

>Translated_108_residues
MLKCQVYFNFDILNLKGETRMQKTITPLCDNIVLKLKIEDTKTQSGILLALSEKEKSSVGVVVAVGPKVEGLKKDDEVVY
KSYSGSKINLQEEEYLIVSVKDILAQIK
>Mature_108_residues
MLKCQVYFNFDILNLKGETRMQKTITPLCDNIVLKLKIEDTKTQSGILLALSEKEKSSVGVVVAVGPKVEGLKKDDEVVY
KSYSGSKINLQEEEYLIVSVKDILAQIK

Specific function: Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter [H]

COG id: COG0234

COG function: function code O; Co-chaperonin GroES (HSP10)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GroES chaperonin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020818
- InterPro:   IPR018369
- InterPro:   IPR011032 [H]

Pfam domain/function: PF00166 Cpn10 [H]

EC number: NA

Molecular weight: Translated: 12093; Mature: 12093

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKCQVYFNFDILNLKGETRMQKTITPLCDNIVLKLKIEDTKTQSGILLALSEKEKSSVG
CEEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEE
VVVAVGPKVEGLKKDDEVVYKSYSGSKINLQEEEYLIVSVKDILAQIK
EEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHCC
>Mature Secondary Structure
MLKCQVYFNFDILNLKGETRMQKTITPLCDNIVLKLKIEDTKTQSGILLALSEKEKSSVG
CEEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCEE
VVVAVGPKVEGLKKDDEVVYKSYSGSKINLQEEEYLIVSVKDILAQIK
EEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA