| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294688
Identifier: 197294688
GI number: 197294688
Start: 647729
End: 648562
Strand: Direct
Name: 197294688
Synonym: PAa_0648
Alternate gene names: NA
Gene position: 647729-648562 (Clockwise)
Preceding gene: 197294687
Following gene: 197294689
Centisome position: 73.61
GC content: 29.38
Gene sequence:
>834_bases GTGAAACAATCAAACTTTTTAGAAAAACATTTAGTAACTATTATTATTATTTTTCTTTTCGGAATAGCAATTATCATAGG CATTAAACAAGGATTTAATGATTATCAAAACGAAAAAAATTCTTTATCTCTTTTGGGACAAACTCCAGAAAAATACTCCT TAGAACCCGAAATCACCCCAACTCCTTCCAGATCTAAACGTTCTACGGAAGAACAAACACAACCCAAAATTCAAACCACT GCTGCGCGTTTAGACCAAATTAAAACTTATCTTTTCATCGAACCTACTGACACTTCTAAATTACCATTGGATTTATCAAA GAGAGAACAAGAAGAAATCAATAAACTAAAAAATAGTTGGAAATTGCGTTTTTTAGGTTATTTAAATCAAGAAAGAGGTG TTATCAATGAAAAACAAAAAGAATGTGACAACCACCAATCTCACTTAAATTCTATTCAACCTCAAATAGAAGCTTTAAAA CCACAACAACAAAAACTAGAACAAAAAAAAGAAGCAAAAGAAGTAAAAGAAAAAGAAATCAAAGACAAAGAAAGACAAAA AGAGTTAGCTTCCCCCAATGATAAAATTAGATTACAAACTGAAATTGAAAAACTCGAAGATGAAGTGATAGAAATAGTTG GTGAAATTGGAAAAATAAAAGTTCAAATCAAAAATTTAGAAACAGACCAAAAATACTACCAAGATATGTTATCTGGTGAT GAAAACTACAAAAGAATTTTAGAAGAACGATATAAAGATGCTGAATTACAAGATAAAAATGAAATCTTAAAATCCCTTGA CTCCCTCTATGAAATTATCCCAAATGAGGGATAA
Upstream 100 bases:
>100_bases TAAATAATTATTTTCTCCAAACATTTTATTAATAAAATTGTATAATGGTGATAAGTGATATAATTAATTATCACCATTAT CAAGAAAGGTAAACAAATTT
Downstream 100 bases:
>100_bases ATAACAAATAAGGAGTAATATATAATGTTAGTAAAAAATAAATTACATCTTTTACCATTCTTTTTAATTAGTTGTTTAGG AATATTATTTATTGTTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MKQSNFLEKHLVTIIIIFLFGIAIIIGIKQGFNDYQNEKNSLSLLGQTPEKYSLEPEITPTPSRSKRSTEEQTQPKIQTT AARLDQIKTYLFIEPTDTSKLPLDLSKREQEEINKLKNSWKLRFLGYLNQERGVINEKQKECDNHQSHLNSIQPQIEALK PQQQKLEQKKEAKEVKEKEIKDKERQKELASPNDKIRLQTEIEKLEDEVIEIVGEIGKIKVQIKNLETDQKYYQDMLSGD ENYKRILEERYKDAELQDKNEILKSLDSLYEIIPNEG
Sequences:
>Translated_277_residues MKQSNFLEKHLVTIIIIFLFGIAIIIGIKQGFNDYQNEKNSLSLLGQTPEKYSLEPEITPTPSRSKRSTEEQTQPKIQTT AARLDQIKTYLFIEPTDTSKLPLDLSKREQEEINKLKNSWKLRFLGYLNQERGVINEKQKECDNHQSHLNSIQPQIEALK PQQQKLEQKKEAKEVKEKEIKDKERQKELASPNDKIRLQTEIEKLEDEVIEIVGEIGKIKVQIKNLETDQKYYQDMLSGD ENYKRILEERYKDAELQDKNEILKSLDSLYEIIPNEG >Mature_277_residues MKQSNFLEKHLVTIIIIFLFGIAIIIGIKQGFNDYQNEKNSLSLLGQTPEKYSLEPEITPTPSRSKRSTEEQTQPKIQTT AARLDQIKTYLFIEPTDTSKLPLDLSKREQEEINKLKNSWKLRFLGYLNQERGVINEKQKECDNHQSHLNSIQPQIEALK PQQQKLEQKKEAKEVKEKEIKDKERQKELASPNDKIRLQTEIEKLEDEVIEIVGEIGKIKVQIKNLETDQKYYQDMLSGD ENYKRILEERYKDAELQDKNEILKSLDSLYEIIPNEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32429; Mature: 32429
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSNFLEKHLVTIIIIFLFGIAIIIGIKQGFNDYQNEKNSLSLLGQTPEKYSLEPEITP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHCCCCCCCCC TPSRSKRSTEEQTQPKIQTTAARLDQIKTYLFIEPTDTSKLPLDLSKREQEEINKLKNSW CCCCCCCCCHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH KLRFLGYLNQERGVINEKQKECDNHQSHLNSIQPQIEALKPQQQKLEQKKEAKEVKEKEI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KDKERQKELASPNDKIRLQTEIEKLEDEVIEIVGEIGKIKVQIKNLETDQKYYQDMLSGD HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCC ENYKRILEERYKDAELQDKNEILKSLDSLYEIIPNEG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKQSNFLEKHLVTIIIIFLFGIAIIIGIKQGFNDYQNEKNSLSLLGQTPEKYSLEPEITP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHCCCCCCCCC TPSRSKRSTEEQTQPKIQTTAARLDQIKTYLFIEPTDTSKLPLDLSKREQEEINKLKNSW CCCCCCCCCHHHHCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH KLRFLGYLNQERGVINEKQKECDNHQSHLNSIQPQIEALKPQQQKLEQKKEAKEVKEKEI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KDKERQKELASPNDKIRLQTEIEKLEDEVIEIVGEIGKIKVQIKNLETDQKYYQDMLSGD HHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHCCC ENYKRILEERYKDAELQDKNEILKSLDSLYEIIPNEG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA