| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294567
Identifier: 197294567
GI number: 197294567
Start: 514316
End: 515008
Strand: Reverse
Name: 197294567
Synonym: PAa_0522
Alternate gene names: NA
Gene position: 515008-514316 (Counterclockwise)
Preceding gene: 197294570
Following gene: 197294566
Centisome position: 58.53
GC content: 25.54
Gene sequence:
>693_bases ATGACACCAATTAAGAAAAATACAAAAAACCCATTAAAATTTATGAAAATCAAAAAGATAATTGTTTTTATTTTTTTAGA TATTTTTCTTTTATATTTGTTTATCGTTTCTTTAGGTAGAGTTTTTTTAAAAGAAAAATGTCCTAAATATTTAGGTTTTT CATTTTTTAATGTTGCTTCAGGAAGTATGGAACCATACATTAAAGGACCTCCAATGGGTTCAAATTCAGAAATAGGTGAT ACTGTTTTTGTGAGAGGTGTTTGGGATTGTAAAAACTTGAAGGCATTTAAAAATAATGCTTGCGGAAAAGAACCAGCACA AAAACCTTTTAATAATGATCCTAAAAATACTGAATATAATCCAAATGATGGTGACATCGTTGTTTTTAAAAGTACAACAA AAAAGGATAAAATTATTATTCATAGACTTATTTATAACGATACAGAGAACAAATGTCTTTATACTTGGGGAGATAATAAT GATCATCAACTTTCGGACGAAAAAAAAATTCCTTATGAAAACGTTGTTGGCAAATTAATGTTTAAAGATCGTTATTTTAT TCCAACGATTAACAAATTAATTGAATATTTTGGAAATAAACCTTTATATGCAGTTTTTGCCATTATTTATTTAATTGTTA TGTTTGTACTTTTAGGAATTATTAAAAAAAATTGGAATCAAGCGGATGAATAA
Upstream 100 bases:
>100_bases TAAATTAAATTGCCTTTATTAAAAACCTCTTTTATATGCTATAATTATGTTAGTAATAAAAAAAGAAAAATTAAAAAAGG GATTAAATTGCAAAGTTATC
Downstream 100 bases:
>100_bases TTAAAAGGTAAAAAGTTTCATGTGGAAAAAAATTATTGATTTACAAAGAAAAAAAGATTATTTTCAAAATATAGCTCAAT TTTTAAAAGCAGAAAAAATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MTPIKKNTKNPLKFMKIKKIIVFIFLDIFLLYLFIVSLGRVFLKEKCPKYLGFSFFNVASGSMEPYIKGPPMGSNSEIGD TVFVRGVWDCKNLKAFKNNACGKEPAQKPFNNDPKNTEYNPNDGDIVVFKSTTKKDKIIIHRLIYNDTENKCLYTWGDNN DHQLSDEKKIPYENVVGKLMFKDRYFIPTINKLIEYFGNKPLYAVFAIIYLIVMFVLLGIIKKNWNQADE
Sequences:
>Translated_230_residues MTPIKKNTKNPLKFMKIKKIIVFIFLDIFLLYLFIVSLGRVFLKEKCPKYLGFSFFNVASGSMEPYIKGPPMGSNSEIGD TVFVRGVWDCKNLKAFKNNACGKEPAQKPFNNDPKNTEYNPNDGDIVVFKSTTKKDKIIIHRLIYNDTENKCLYTWGDNN DHQLSDEKKIPYENVVGKLMFKDRYFIPTINKLIEYFGNKPLYAVFAIIYLIVMFVLLGIIKKNWNQADE >Mature_229_residues TPIKKNTKNPLKFMKIKKIIVFIFLDIFLLYLFIVSLGRVFLKEKCPKYLGFSFFNVASGSMEPYIKGPPMGSNSEIGDT VFVRGVWDCKNLKAFKNNACGKEPAQKPFNNDPKNTEYNPNDGDIVVFKSTTKKDKIIIHRLIYNDTENKCLYTWGDNND HQLSDEKKIPYENVVGKLMFKDRYFIPTINKLIEYFGNKPLYAVFAIIYLIVMFVLLGIIKKNWNQADE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26669; Mature: 26537
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPIKKNTKNPLKFMKIKKIIVFIFLDIFLLYLFIVSLGRVFLKEKCPKYLGFSFFNVAS CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCC GSMEPYIKGPPMGSNSEIGDTVFVRGVWDCKNLKAFKNNACGKEPAQKPFNNDPKNTEYN CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PNDGDIVVFKSTTKKDKIIIHRLIYNDTENKCLYTWGDNNDHQLSDEKKIPYENVVGKLM CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH FKDRYFIPTINKLIEYFGNKPLYAVFAIIYLIVMFVLLGIIKKNWNQADE HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TPIKKNTKNPLKFMKIKKIIVFIFLDIFLLYLFIVSLGRVFLKEKCPKYLGFSFFNVAS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHCC GSMEPYIKGPPMGSNSEIGDTVFVRGVWDCKNLKAFKNNACGKEPAQKPFNNDPKNTEYN CCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC PNDGDIVVFKSTTKKDKIIIHRLIYNDTENKCLYTWGDNNDHQLSDEKKIPYENVVGKLM CCCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHH FKDRYFIPTINKLIEYFGNKPLYAVFAIIYLIVMFVLLGIIKKNWNQADE HCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA