Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is znuB [H]

Identifier: 197294529

GI number: 197294529

Start: 479443

End: 480531

Strand: Direct

Name: znuB [H]

Synonym: PAa_0484

Alternate gene names: 197294529

Gene position: 479443-480531 (Clockwise)

Preceding gene: 197294528

Following gene: 197294530

Centisome position: 54.48

GC content: 26.26

Gene sequence:

>1089_bases
ATGTTAAATATAACTAATCAGTTTGATTGGGAAGTTTATGTAGTTTTAATTTTTTGCTCTTTGGCTTTATCGGTTTTAGG
TGTTTTTTTGGTTTTAAAAAAAGTATCTATGATTATTGATGCTATTAGTCATAGTGTTTTGTTAGGAATTGTTTTGGCTT
TTTTATTTATCAAACAACTTAATTCTCCTTTTTTAATTATTGGTGGCACTTTGATTGGCATTTTAAATTTTTATTTAGTT
GAAATTGTGGGTAAAAATCCTCGGATTAAAAAAGATGCCGCCATTGGGATTGTCTTTAGTTTTTTCTTCGCTTTAGCGAT
TTTAATTATTAGTGTTTTTATTCGAGATGTACATATGGACACAGATGCTGTTTTTTTAGGCAACGTTGAGTTAACTGATG
TTAGTGTTTTGAAAAAAATTATTCCTATTTTATTATTAAATCTTGGTTTTATTTTTTTCTTTTATAAAGAATTAAAAATT
TATATTTTTGATCCTGTTTTAGCTTCTATTTTAGGTTTTTCAACTTTTTTAATTAATTATTGTTTAATCACCTTAATTTC
TGTTACAGCGGTCATTTCTTTTGATATAGTGGGTTCCGTTATGACAATTGCTTCTATTATTGGTCCTGCTGCTATTTCTC
TTTTGTTAAGTAAAAAACTATTAAATTGTATTTTATTGTCTTTATGGTTTGCCTTTGTCAGCTCTAGTTTAGGTTATTAC
TTAAGTATGATTACTGATTTGCCAGTGGCAGGCTTGATTTCGATGACTATTTTGACTATCTTTTTGTTGGTTCTTTTCTT
GGAACCCAAAAACGGAATTGTTGCAAAAATGTTTTATAATCGTTTACAAAAAAAATCTTTTATGGTAATATCTTTTTTGA
TGCATTTAAGCAAGAACGAAAAACATCAAAAAGAAAATCAAATTTTAAAATTAAAAGAAGAACTTCAATGGTCTTTGACT
TCTTATAACAAATGTGTTGATCAAGCTTTAAAATTAGGTTATATCGTTATCAAAAAAAACCAAGTTTTTTTAAAAGATTT
AGGTAAACAAATTTTATCCCAAAAGATATCTTTATGGAAATTAGAATAA

Upstream 100 bases:

>100_bases
AGTTCTTTTGTTGGCGCCTAAATATGGTTTTATTTCTAGAAAAATATTTAATTCAAAAAAAGAAAAAGTTTTTAAATTTA
ATTAATGGTTAGGTACAAAA

Downstream 100 bases:

>100_bases
AAACTCGATTTCTGTAAATACTTTTTTTTTATTATACTTAAGATGAAAATATATTTTATGGCCTTTTTCTTCTTTTAATG
AAATCAATAAGTAAAATCAA

Product: ABC-type Zn/Mn transport system,permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV
EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI
YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY
LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT
SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE

Sequences:

>Translated_362_residues
MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV
EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI
YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY
LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT
SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE
>Mature_362_residues
MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQLNSPFLIIGGTLIGILNFYLV
EIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMDTDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKI
YIFDPVLASILGFSTFLINYCLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY
LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNEKHQKENQILKLKEELQWSLT
SYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWKLE

Specific function: Part of an ATP-driven transport system troABCD for zinc [H]

COG id: COG1108

COG function: function code P; ABC-type Mn2+/Zn2+ transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-3 integral membrane protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001626 [H]

Pfam domain/function: PF00950 ABC-3 [H]

EC number: NA

Molecular weight: Translated: 40747; Mature: 40747

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSPFLIIGGTLIGILNFYLVEIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMD
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKIYIFDPVLASILGFSTFLINY
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
CLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KHQKENQILKLKEELQWSLTSYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHC
LE
CC
>Mature Secondary Structure
MLNITNQFDWEVYVVLIFCSLALSVLGVFLVLKKVSMIIDAISHSVLLGIVLAFLFIKQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NSPFLIIGGTLIGILNFYLVEIVGKNPRIKKDAAIGIVFSFFFALAILIISVFIRDVHMD
CCCEEEEHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDAVFLGNVELTDVSVLKKIIPILLLNLGFIFFFYKELKIYIFDPVLASILGFSTFLINY
CCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHH
CLITLISVTAVISFDIVGSVMTIASIIGPAAISLLLSKKLLNCILLSLWFAFVSSSLGYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSMITDLPVAGLISMTILTIFLLVLFLEPKNGIVAKMFYNRLQKKSFMVISFLMHLSKNE
HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
KHQKENQILKLKEELQWSLTSYNKCVDQALKLGYIVIKKNQVFLKDLGKQILSQKISLWK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHHCCHHHHC
LE
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9332349; 9665876 [H]