| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294458
Identifier: 197294458
GI number: 197294458
Start: 394113
End: 395204
Strand: Direct
Name: 197294458
Synonym: PAa_0383
Alternate gene names: NA
Gene position: 394113-395204 (Clockwise)
Preceding gene: 197294457
Following gene: 197294459
Centisome position: 44.79
GC content: 28.11
Gene sequence:
>1092_bases ATGGAGTTATTTAAAGTATTAGTTATTATAGGTATTTTAGGAGTTTTTTTTGGATTGGGTCCTTTATTGATTTGGGTTGT TCAAAAACACGTAAATAATAAATTAAATAATGTAGAAAATATTAAATTACAAATTGAAGTTGAGACAATAACTAAGCAAG AAAAATTAAACCAAAAAATATCTGAGTTAGTAAACAATAAAGCTTTATCAGATAAAGAAAAAACTGAATTAGAAGAAGAA ATAAATTCAATTCAAACTGAATTAAACCAAAAACAAGCAGAATTATCACATAATCAAATGTTGACAGGAAAATTAAAAGC TAAAAAATATACAAAAAGAAATCCAATAAAAGCTATAATTATATATTATTGTTTTATATTAAGTATAATTGCTATTTTTG GTGGTTTTATATTTTTAGACAATAAATACGATATAACAAATTCAAAACCCAAAACTTATACTATTTCTGAACTGAAAGTA GAAATTGAATCTGAATGGTTTGAAGGATACCGTTCTAGAGATGATAACTACCAAATTAAGAAATATTATAAAGCAGATGG TTATGACCCCAATGCAGAATTTGGGGCCACAAAAGATTGGAAAGGTAGTCCTTGTCAAAGTTATAGTCATGATGTTAATC AACTTGTTTTGGGTCACCAAATGATTAAAGTTAAATACACTTTCTACGGTCTCAACGGTCTTGGTCGTGGACAGCACCGT GAATACGAGCCAAATGATATAATGCCGTTTATGAAAAACCCTTTTGACAAATGGGAACATAAACCTTCAACTAATGATTA TTTTGCTACTTTCAATACAGGAATTAACCGCGCTGATTCACAATTTCAAAATAAGTTGCTTAAAGACTTTATAGACCACT ACATGTACCTCAACTACAAAGGCCCAAAATGGTTAATTGAAGAAGATAAAGACTTTTTTATGGATGAAGTGGAATGTCAT ATCATAGACCCAAAGGACTCTAGGTTTCCAAAAGATGAAATGAAAAACTACTATCTTCACTTCAACCCAAAACAAAAATA TCTAACACTTTACAATAAGAAATTTAATATTAAAAATAATGAAGAAAATTAA
Upstream 100 bases:
>100_bases AACATGGTTTGGTCGGTAATGCAATTTTTTTGCATTACCAGATTAGATTATGATACAATGATGATAAGTTATAAAAATAA AAAAGGAAGTTAATTATAGG
Downstream 100 bases:
>100_bases AAAAAGGAGTTTGGTAATTAATGCTTAAATTACAAAATCAATTAAAAAAATAATTAATATTTTAAAACAACAATAAAACT TTTTAAAAGATTTTATTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEVETITKQEKLNQKISELVNNKALSDKEKTELEEE INSIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFILSIIAIFGGFIFLDNKYDITNSKPKTYTISELKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNQLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFDKWEHKPSTNDYFATFNTGINRADSQFQNKLLKDFIDHYMYLNYKGPKWLIEEDKDFFMDEVECH IIDPKDSRFPKDEMKNYYLHFNPKQKYLTLYNKKFNIKNNEEN
Sequences:
>Translated_363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEVETITKQEKLNQKISELVNNKALSDKEKTELEEE INSIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFILSIIAIFGGFIFLDNKYDITNSKPKTYTISELKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNQLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFDKWEHKPSTNDYFATFNTGINRADSQFQNKLLKDFIDHYMYLNYKGPKWLIEEDKDFFMDEVECH IIDPKDSRFPKDEMKNYYLHFNPKQKYLTLYNKKFNIKNNEEN >Mature_363_residues MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEVETITKQEKLNQKISELVNNKALSDKEKTELEEE INSIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAIIIYYCFILSIIAIFGGFIFLDNKYDITNSKPKTYTISELKV EIESEWFEGYRSRDDNYQIKKYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNQLVLGHQMIKVKYTFYGLNGLGRGQHR EYEPNDIMPFMKNPFDKWEHKPSTNDYFATFNTGINRADSQFQNKLLKDFIDHYMYLNYKGPKWLIEEDKDFFMDEVECH IIDPKDSRFPKDEMKNYYLHFNPKQKYLTLYNKKFNIKNNEEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42933; Mature: 42933
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEVETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH SELVNNKALSDKEKTELEEEINSIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCCCHHHHH IYYCFILSIIAIFGGFIFLDNKYDITNSKPKTYTISELKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEHHHHEEEEHHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNQLVLGHQMIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFDKWEHKPSTNDYFATFNTGINRADSQFQNKLLKDFIDHYMYLNYK CCCCCCCCHHHCCCHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECC GPKWLIEEDKDFFMDEVECHIIDPKDSRFPKDEMKNYYLHFNPKQKYLTLYNKKFNIKNN CCEEEECCCCHHCCCCCEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEECEEECCCCC EEN CCC >Mature Secondary Structure MELFKVLVIIGILGVFFGLGPLLIWVVQKHVNNKLNNVENIKLQIEVETITKQEKLNQKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEHHHHHHHHHHHHH SELVNNKALSDKEKTELEEEINSIQTELNQKQAELSHNQMLTGKLKAKKYTKRNPIKAII HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHCCCCCHHHHH IYYCFILSIIAIFGGFIFLDNKYDITNSKPKTYTISELKVEIESEWFEGYRSRDDNYQIK HHHHHHHHHHHHHCCEEEECCEEECCCCCCCEEEHHHHEEEEHHHHHHHHHCCCCCEEEE KYYKADGYDPNAEFGATKDWKGSPCQSYSHDVNQLVLGHQMIKVKYTFYGLNGLGRGQHR EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEEEECCCCCCCCCC EYEPNDIMPFMKNPFDKWEHKPSTNDYFATFNTGINRADSQFQNKLLKDFIDHYMYLNYK CCCCCCCCHHHCCCHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEEEECC GPKWLIEEDKDFFMDEVECHIIDPKDSRFPKDEMKNYYLHFNPKQKYLTLYNKKFNIKNN CCEEEECCCCHHCCCCCEEEEECCCCCCCCHHHHCCEEEEECCCCCEEEEECEEECCCCC EEN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA