| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
Click here to switch to the map view.
The map label for this gene is 197294437
Identifier: 197294437
GI number: 197294437
Start: 370915
End: 371727
Strand: Reverse
Name: 197294437
Synonym: PAa_0358
Alternate gene names: NA
Gene position: 371727-370915 (Counterclockwise)
Preceding gene: 197294438
Following gene: 197294436
Centisome position: 42.24
GC content: 36.53
Gene sequence:
>813_bases ATGACTACCAATCCAAACCAAAAAATCACTTATAGAAACGTTTATAAAATAATCACCGAATTTAGTCCTATCACAAACAA AAAAACCAAAGAAACCGAATGCTCCAAAGACGGAAAAACAATCTACTCTTTTGCTTCACACAACTCTCGCACAGGAAACA AAACCAAACAAATCATTTACCAAGACAACATGATTTGGCGTATTTATAAATATGAATACAACCTAACGACAATTAAAGAA ACTATCTACTATCCTGATAACACAACGATTAATATGATTCAGGAATACGACCGCAAAACACAAAACCGAACCAAACAAAT CATTTACAGCGGCGGAATAACGAAAGACCAAATTGAACACAACCCCGAAACAGGCGAACAAATTAAAAGAACTTATTACC GAAACGACGGCAAAACAACTAAGGAAGTTGAGGACTGCAACCCCCAAACAAGGAAATTAACCAAACGAACCTACTACCAC CCCAACGGAAAAATCAAAACCATCCACGATTTCGACCCCGAAACTGGTAAAAAAACCAAATATACGAAATTCAAAGCAAA CGGAGTCACAATTGAATACACCAGAATATATCGCCGCGAAATAAGTCGATGGGTCAAAATATCTGCACGATACACAAAAA AAGAAGAATGGGTGGCATATCACGAAGCAGGGCACGCTTTAATTACCTTTTTACATCCCCAAAATTATGAGGTGGCATAT CTCACAATTATACCAAACCTAGAAAAAAAACACATTAGGACATTGTCAACCTTTGCTTGTAAATCACAATTTCAAAATAG GCGCTTTAATTGA
Upstream 100 bases:
>100_bases TTTCAATTTCTACCAAAAACCGTAAATCACACTTAAATACAAAACCAAATCCCAACACGCTCGGCAACCAACAAACAATA AATAAAAAGAGCAAAACAAA
Downstream 100 bases:
>100_bases TTTAGCTGGGTACGCCGCAGAACAGTTAATGGCCCAAGAAAACCTAATAGATAAATCAAAAGTGGGTATTGGTTGCGGCA CAGATTTCAAACACGCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MTTNPNQKITYRNVYKIITEFSPITNKKTKETECSKDGKTIYSFASHNSRTGNKTKQIIYQDNMIWRIYKYEYNLTTIKE TIYYPDNTTINMIQEYDRKTQNRTKQIIYSGGITKDQIEHNPETGEQIKRTYYRNDGKTTKEVEDCNPQTRKLTKRTYYH PNGKIKTIHDFDPETGKKTKYTKFKANGVTIEYTRIYRREISRWVKISARYTKKEEWVAYHEAGHALITFLHPQNYEVAY LTIIPNLEKKHIRTLSTFACKSQFQNRRFN
Sequences:
>Translated_270_residues MTTNPNQKITYRNVYKIITEFSPITNKKTKETECSKDGKTIYSFASHNSRTGNKTKQIIYQDNMIWRIYKYEYNLTTIKE TIYYPDNTTINMIQEYDRKTQNRTKQIIYSGGITKDQIEHNPETGEQIKRTYYRNDGKTTKEVEDCNPQTRKLTKRTYYH PNGKIKTIHDFDPETGKKTKYTKFKANGVTIEYTRIYRREISRWVKISARYTKKEEWVAYHEAGHALITFLHPQNYEVAY LTIIPNLEKKHIRTLSTFACKSQFQNRRFN >Mature_269_residues TTNPNQKITYRNVYKIITEFSPITNKKTKETECSKDGKTIYSFASHNSRTGNKTKQIIYQDNMIWRIYKYEYNLTTIKET IYYPDNTTINMIQEYDRKTQNRTKQIIYSGGITKDQIEHNPETGEQIKRTYYRNDGKTTKEVEDCNPQTRKLTKRTYYHP NGKIKTIHDFDPETGKKTKYTKFKANGVTIEYTRIYRREISRWVKISARYTKKEEWVAYHEAGHALITFLHPQNYEVAYL TIIPNLEKKHIRTLSTFACKSQFQNRRFN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32289; Mature: 32158
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNPNQKITYRNVYKIITEFSPITNKKTKETECSKDGKTIYSFASHNSRTGNKTKQIIY CCCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE QDNMIWRIYKYEYNLTTIKETIYYPDNTTINMIQEYDRKTQNRTKQIIYSGGITKDQIEH ECCEEEEEEEEEECEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHEEEEECCCCHHHHCC NPETGEQIKRTYYRNDGKTTKEVEDCNPQTRKLTKRTYYHPNGKIKTIHDFDPETGKKTK CCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCE YTKFKANGVTIEYTRIYRREISRWVKISARYTKKEEWVAYHEAGHALITFLHPQNYEVAY EEEEEECCEEEEHHHHHHHHHHHHHEEHHHCCCCHHHEEEECCCCEEEEEECCCCCCEEE LTIIPNLEKKHIRTLSTFACKSQFQNRRFN EEEECCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTNPNQKITYRNVYKIITEFSPITNKKTKETECSKDGKTIYSFASHNSRTGNKTKQIIY CCCCCCEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEE QDNMIWRIYKYEYNLTTIKETIYYPDNTTINMIQEYDRKTQNRTKQIIYSGGITKDQIEH ECCEEEEEEEEEECEEEEEEEEECCCCCEEHHHHHHHHHHHHHHHEEEEECCCCHHHHCC NPETGEQIKRTYYRNDGKTTKEVEDCNPQTRKLTKRTYYHPNGKIKTIHDFDPETGKKTK CCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHEEECCCCCEEEEECCCCCCCCCCE YTKFKANGVTIEYTRIYRREISRWVKISARYTKKEEWVAYHEAGHALITFLHPQNYEVAY EEEEEECCEEEEHHHHHHHHHHHHHEEHHHCCCCHHHEEEECCCCEEEEEECCCCCCEEE LTIIPNLEKKHIRTLSTFACKSQFQNRRFN EEEECCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA