| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294436
Identifier: 197294436
GI number: 197294436
Start: 370602
End: 370886
Strand: Reverse
Name: 197294436
Synonym: PAa_0357
Alternate gene names: NA
Gene position: 370886-370602 (Counterclockwise)
Preceding gene: 197294437
Following gene: 197294435
Centisome position: 42.15
GC content: 35.79
Gene sequence:
>285_bases ATGGCCCAAGAAAACCTAATAGATAAATCAAAAGTGGGTATTGGTTGCGGCACAGATTTCAAACACGCTCGCGAATTATT ACAAAAAAACTCATCCGACCCACGAAAAGATTTTGATTTATTCGTGGAAGAAGCAAAAAATCTGCTTGCCTTAAACAAAG AAACTTTAAAACAAATCGCTAAACGCTTAATGATTGAAAAAGTTTTAAACCACAAGGAACTTAAAGAAATTTGCCAACAA TATCCCCTAAAAGGCATCGACAACTTCTCATCCAGCCGAAGATAA
Upstream 100 bases:
>100_bases GAAAAAAAACACATTAGGACATTGTCAACCTTTGCTTGTAAATCACAATTTCAAAATAGGCGCTTTAATTGATTTAGCTG GGTACGCCGCAGAACAGTTA
Downstream 100 bases:
>100_bases ATAATGCACCAAAAAGACCCTTTCAAGGGTCTTTTTTTTGATTTTCTCACACAAACCACAAATAACAACGCCTCAGCAGA AAAACAAATAAACATAAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAQENLIDKSKVGIGCGTDFKHARELLQKNSSDPRKDFDLFVEEAKNLLALNKETLKQIAKRLMIEKVLNHKELKEICQQ YPLKGIDNFSSSRR
Sequences:
>Translated_94_residues MAQENLIDKSKVGIGCGTDFKHARELLQKNSSDPRKDFDLFVEEAKNLLALNKETLKQIAKRLMIEKVLNHKELKEICQQ YPLKGIDNFSSSRR >Mature_93_residues AQENLIDKSKVGIGCGTDFKHARELLQKNSSDPRKDFDLFVEEAKNLLALNKETLKQIAKRLMIEKVLNHKELKEICQQY PLKGIDNFSSSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10846; Mature: 10714
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQENLIDKSKVGIGCGTDFKHARELLQKNSSDPRKDFDLFVEEAKNLLALNKETLKQIA CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH KRLMIEKVLNHKELKEICQQYPLKGIDNFSSSRR HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AQENLIDKSKVGIGCGTDFKHARELLQKNSSDPRKDFDLFVEEAKNLLALNKETLKQIA CCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH KRLMIEKVLNHKELKEICQQYPLKGIDNFSSSRR HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA