| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294314
Identifier: 197294314
GI number: 197294314
Start: 214712
End: 215329
Strand: Reverse
Name: 197294314
Synonym: PAa_0177
Alternate gene names: NA
Gene position: 215329-214712 (Counterclockwise)
Preceding gene: 197294315
Following gene: 197294313
Centisome position: 24.47
GC content: 24.11
Gene sequence:
>618_bases ATGGATACATCATCAAAAAAAGAAAAAGAAAAAATTATGGTACAACAAAATATTTATAATAAAAACAAAATTTTAAGACA CATCGTTCTTGCCTCTTTTTTATCATATATGCCTGTTGCACTATCTTATTTAATAAAAGAAATAGGTGTTCCTGGCTTTT TAATTCCTTATTTTCGTTATTTTATTTTTTTTCCTTTGATTGTAATGTCCTTTTACGTTCCTAAAATGATGGCTTTCGTG GGTGGTTTTTTATCCGAAATGTTCATTTTTTATTTAAAAACCAAAAGGACTCATTATAATCCTTTAGAAAGTCTTTTTTG TGCTCTTTGTTTTGTTTTAATTCCTAGTTTATTCTTAAAAAAAAAAGATAATTTTTGTAAATTTTATTTTGTGATTCTTT TGGCATCAAGTTTATTTCAAATTGTAAGTTGGTATAATATATTGAAATATCGTTATAAACTAGACTTATTGGATATCCAA AAATTCGATCAAATAATTCACATATTAAAAATTGATTTAGGGATAAGATTAATAGTTATTGTTCCTATCATTTCGCTTAT ACTAGCTTTGATTTTGAAAAAATTACTTCCAAGATTAGAGTTTTTTGACAACATTTAA
Upstream 100 bases:
>100_bases TCTTAAATAATTTTTTAATCACGGGGTTTATATTCTCTTTTTTAAATCCTAGGCTCAAAATGTATTTACAAAATAAATAA TAATATATAAATAAATTAAT
Downstream 100 bases:
>100_bases TTAACTAAAGGAGCATTTTATGCAATTTAAAGATTTTAAATATCAAAGAATTAATATTCCCAAAATCAAAGAGCAAGTTG CTCCGATGATTGAATCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MDTSSKKEKEKIMVQQNIYNKNKILRHIVLASFLSYMPVALSYLIKEIGVPGFLIPYFRYFIFFPLIVMSFYVPKMMAFV GGFLSEMFIFYLKTKRTHYNPLESLFCALCFVLIPSLFLKKKDNFCKFYFVILLASSLFQIVSWYNILKYRYKLDLLDIQ KFDQIIHILKIDLGIRLIVIVPIISLILALILKKLLPRLEFFDNI
Sequences:
>Translated_205_residues MDTSSKKEKEKIMVQQNIYNKNKILRHIVLASFLSYMPVALSYLIKEIGVPGFLIPYFRYFIFFPLIVMSFYVPKMMAFV GGFLSEMFIFYLKTKRTHYNPLESLFCALCFVLIPSLFLKKKDNFCKFYFVILLASSLFQIVSWYNILKYRYKLDLLDIQ KFDQIIHILKIDLGIRLIVIVPIISLILALILKKLLPRLEFFDNI >Mature_205_residues MDTSSKKEKEKIMVQQNIYNKNKILRHIVLASFLSYMPVALSYLIKEIGVPGFLIPYFRYFIFFPLIVMSFYVPKMMAFV GGFLSEMFIFYLKTKRTHYNPLESLFCALCFVLIPSLFLKKKDNFCKFYFVILLASSLFQIVSWYNILKYRYKLDLLDIQ KFDQIIHILKIDLGIRLIVIVPIISLILALILKKLLPRLEFFDNI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24300; Mature: 24300
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTSSKKEKEKIMVQQNIYNKNKILRHIVLASFLSYMPVALSYLIKEIGVPGFLIPYFRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FIFFPLIVMSFYVPKMMAFVGGFLSEMFIFYLKTKRTHYNPLESLFCALCFVLIPSLFLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KKDNFCKFYFVILLASSLFQIVSWYNILKYRYKLDLLDIQKFDQIIHILKIDLGIRLIVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPIISLILALILKKLLPRLEFFDNI HHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDTSSKKEKEKIMVQQNIYNKNKILRHIVLASFLSYMPVALSYLIKEIGVPGFLIPYFRY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FIFFPLIVMSFYVPKMMAFVGGFLSEMFIFYLKTKRTHYNPLESLFCALCFVLIPSLFLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH KKDNFCKFYFVILLASSLFQIVSWYNILKYRYKLDLLDIQKFDQIIHILKIDLGIRLIVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPIISLILALILKKLLPRLEFFDNI HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA