| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294299
Identifier: 197294299
GI number: 197294299
Start: 192474
End: 193001
Strand: Reverse
Name: 197294299
Synonym: PAa_0162
Alternate gene names: NA
Gene position: 193001-192474 (Counterclockwise)
Preceding gene: 197294300
Following gene: 197294298
Centisome position: 21.93
GC content: 27.46
Gene sequence:
>528_bases TTGAAAAAACAAACAAAATATTTAATTTTCTTTATAATTGCATTAATTTCCATTATTATTTTCTGCCTTTTTATGCACTA CATTACCAACAAATCACTCAAATATACAAAATCTACTCAATTCACAAATCAAAAAGAAATAGAAAGGAAAAGTGATAACG ACTTTATAAAACAAATAATAGAATATAACAAAAAAATTGTACAATGGCAAAATCAATGTTATATTAAACCATATACAGAT TACGGAGCGTGGGAAATTAAAGATAAGTTTGGTAAAGAATCTAGAACTATTTATAATCAATATGGTAAAGCATGTAATTA TACCTTTATTAAAAGATTTTTTGTTGATAATTATTATATTGAAGGCAAAGAAATTTGTGTTGGAAGCAATAAGTTTGATG ATTATTACGACACCACCCAACCTCCACTTCAACCAACCCCTCCCCAATATCACGAATTTCGCCTTGATTACCCTTCAACT CGTATTTCTAGTTGTGATGTATATAACGAAGCCAACCAAAAAAATTAA
Upstream 100 bases:
>100_bases AAAATTATAATCTATGCCAAAAACTTGTTTTTTTTGATGATATAATTAAATCATACACTGGTTTTTAATAAAACCAAGAA AGGAAATAATTCTTAAAAAA
Downstream 100 bases:
>100_bases AACATTTAGATTTCTTTTTGGAAATAACAAATATGATGAAATTATATACGACCGCGAAACAGGCAATATCTCTTTAATAA ATAATTATTATCCTAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKKQTKYLIFFIIALISIIIFCLFMHYITNKSLKYTKSTQFTNQKEIERKSDNDFIKQIIEYNKKIVQWQNQCYIKPYTD YGAWEIKDKFGKESRTIYNQYGKACNYTFIKRFFVDNYYIEGKEICVGSNKFDDYYDTTQPPLQPTPPQYHEFRLDYPST RISSCDVYNEANQKN
Sequences:
>Translated_175_residues MKKQTKYLIFFIIALISIIIFCLFMHYITNKSLKYTKSTQFTNQKEIERKSDNDFIKQIIEYNKKIVQWQNQCYIKPYTD YGAWEIKDKFGKESRTIYNQYGKACNYTFIKRFFVDNYYIEGKEICVGSNKFDDYYDTTQPPLQPTPPQYHEFRLDYPST RISSCDVYNEANQKN >Mature_175_residues MKKQTKYLIFFIIALISIIIFCLFMHYITNKSLKYTKSTQFTNQKEIERKSDNDFIKQIIEYNKKIVQWQNQCYIKPYTD YGAWEIKDKFGKESRTIYNQYGKACNYTFIKRFFVDNYYIEGKEICVGSNKFDDYYDTTQPPLQPTPPQYHEFRLDYPST RISSCDVYNEANQKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21132; Mature: 21132
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKQTKYLIFFIIALISIIIFCLFMHYITNKSLKYTKSTQFTNQKEIERKSDNDFIKQII CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHH EYNKKIVQWQNQCYIKPYTDYGAWEIKDKFGKESRTIYNQYGKACNYTFIKRFFVDNYYI HHHHHHHHHCCCEEEEECCCCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCEEE EGKEICVGSNKFDDYYDTTQPPLQPTPPQYHEFRLDYPSTRISSCDVYNEANQKN CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure MKKQTKYLIFFIIALISIIIFCLFMHYITNKSLKYTKSTQFTNQKEIERKSDNDFIKQII CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHH EYNKKIVQWQNQCYIKPYTDYGAWEIKDKFGKESRTIYNQYGKACNYTFIKRFFVDNYYI HHHHHHHHHCCCEEEEECCCCCCEEEHHHHCCHHHHHHHHHCCCCCHHHHHHHHHCCEEE EGKEICVGSNKFDDYYDTTQPPLQPTPPQYHEFRLDYPSTRISSCDVYNEANQKN CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA