| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294298
Identifier: 197294298
GI number: 197294298
Start: 191934
End: 192311
Strand: Reverse
Name: 197294298
Synonym: PAa_0161
Alternate gene names: NA
Gene position: 192311-191934 (Counterclockwise)
Preceding gene: 197294299
Following gene: 197294297
Centisome position: 21.85
GC content: 40.74
Gene sequence:
>378_bases TTGATCTCTTTTATTTTCAACCTATTACCCAATAGGTCTTTTTTTATACCCTTATTTCCACCCAAAGAGCCTATTTCCCT AGGCTCTTTTTTCTTTTCTTCTACCCTCCATCCTCCCACTCTCTTCACAAAACAAACTCACCTCAACTCCACCACACACA AACACACATTATCTGGCTTGGTTATAAAAACATTCATCAAATTACATCCATCTCGCTTGCCGCAATCTCTATTCAATAAA AAAACAAGTTTCAACACGCTATCCCCACAAACTACTAATAAATACCCCAAACACACAACACCCCCCAACCTTTCCTGGCC AACAATCCACCCCTACAATCACCACCCCTCTCGCCTTACCACAATCCCTCTACAATAA
Upstream 100 bases:
>100_bases GCAATATCTCTTTAATAAATAATTATTATCCTAATGGTCGTCAAATGGGATATTTTACTTATGACCCTAAAACAGGAAAG TTCGTTAATTCCGTACGTTT
Downstream 100 bases:
>100_bases AAACCAACATTTCAACACACCACACACCAACCTGTCCTAAACAAGACGTAAAACTGTAAGAAATTTATAATCTATGCCAA AAAGTTGTTTTTTTTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MISFIFNLLPNRSFFIPLFPPKEPISLGSFFFSSTLHPPTLFTKQTHLNSTTHKHTLSGLVIKTFIKLHPSRLPQSLFNK KTSFNTLSPQTTNKYPKHTTPPNLSWPTIHPYNHHPSRLTTIPLQ
Sequences:
>Translated_125_residues MISFIFNLLPNRSFFIPLFPPKEPISLGSFFFSSTLHPPTLFTKQTHLNSTTHKHTLSGLVIKTFIKLHPSRLPQSLFNK KTSFNTLSPQTTNKYPKHTTPPNLSWPTIHPYNHHPSRLTTIPLQ >Mature_125_residues MISFIFNLLPNRSFFIPLFPPKEPISLGSFFFSSTLHPPTLFTKQTHLNSTTHKHTLSGLVIKTFIKLHPSRLPQSLFNK KTSFNTLSPQTTNKYPKHTTPPNLSWPTIHPYNHHPSRLTTIPLQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14357; Mature: 14357
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISFIFNLLPNRSFFIPLFPPKEPISLGSFFFSSTLHPPTLFTKQTHLNSTTHKHTLSGL CHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHH VIKTFIKLHPSRLPQSLFNKKTSFNTLSPQTTNKYPKHTTPPNLSWPTIHPYNHHPSRLT HHHHHHHHCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TIPLQ EECCC >Mature Secondary Structure MISFIFNLLPNRSFFIPLFPPKEPISLGSFFFSSTLHPPTLFTKQTHLNSTTHKHTLSGL CHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCEEECCCCCCCCCCHHHHHHH VIKTFIKLHPSRLPQSLFNKKTSFNTLSPQTTNKYPKHTTPPNLSWPTIHPYNHHPSRLT HHHHHHHHCHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE TIPLQ EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA