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The map label for this gene is sua5 [H]

Identifier: 197294283

GI number: 197294283

Start: 175035

End: 175601

Strand: Reverse

Name: sua5 [H]

Synonym: PAa_0146

Alternate gene names: 197294283

Gene position: 175601-175035 (Counterclockwise)

Preceding gene: 197294284

Following gene: 197294281

Centisome position: 19.96

GC content: 27.51

Gene sequence:

>567_bases
GTGAATAATACAAAACCACTCAAAAACATCATCATTTTTCCCACAGATACAGTTTATGGGATGGGAGTTTCTTTATATGA
CGAAAAAGGACTAAAAGAAATTTATCAATTGAAAAAAAGATCTTTGCAAAAAAACATTATTGTTTTATGTTCTTCTTTAA
AAGAGGCTCAAACTTTAGTTAAGTTTAATGAAATAAGTTATCAATTAGCCACTAAGTTTTTTCCAGGACCTTTAACTTTA
ATTTTGAAAACCCAAACTAGTTATTTGAAAAAAACAGGACAAAAAACTTTAGGAATCAGAATTCCCAATCATCCTTTGGC
TTTGTCTCTTTTAAAAAAATATGGTCCTTTAAAAACCACTTCTGTTAACGAAAGTGGCAAAGAACCTTTAAATTATTACA
ATACTATTTATCAAATGTATAATAATAAAGTTGGCTTCATTTATCCTAATGATTATCCAATTTTGAAAGTGGCTTCTACT
ATTGTTGATGCAACCACTAATAAATTGATTGTTTTAAGACAAGGAAGCATTAGTGAAGCAGAAATTAAAAAAATTGCAAA
ATTATGA

Upstream 100 bases:

>100_bases
GGACTTACTTTGCAAAAATTAGACATCATTATGGAAGGCAAATTAGATTTTATCATTGAACCTTTGATTGATGCCACTCA
AAAAGAAAAATTAGTTCAAA

Downstream 100 bases:

>100_bases
TAATGGCAAAATATTTTTACCTAAGAAAAAGAATTCCAAACCGGTATCTAGATTGATAGAACCTATTTTGGATTGATATT
CTAATTCTATTAAAGTCAAA

Product: Translation factor

Products: NA

Alternate protein names: t(6)A37 threonylcarbamoyladenosine biosynthesis protein YwlC [H]

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MNNTKPLKNIIIFPTDTVYGMGVSLYDEKGLKEIYQLKKRSLQKNIIVLCSSLKEAQTLVKFNEISYQLATKFFPGPLTL
ILKTQTSYLKKTGQKTLGIRIPNHPLALSLLKKYGPLKTTSVNESGKEPLNYYNTIYQMYNNKVGFIYPNDYPILKVAST
IVDATTNKLIVLRQGSISEAEIKKIAKL

Sequences:

>Translated_188_residues
MNNTKPLKNIIIFPTDTVYGMGVSLYDEKGLKEIYQLKKRSLQKNIIVLCSSLKEAQTLVKFNEISYQLATKFFPGPLTL
ILKTQTSYLKKTGQKTLGIRIPNHPLALSLLKKYGPLKTTSVNESGKEPLNYYNTIYQMYNNKVGFIYPNDYPILKVAST
IVDATTNKLIVLRQGSISEAEIKKIAKL
>Mature_188_residues
MNNTKPLKNIIIFPTDTVYGMGVSLYDEKGLKEIYQLKKRSLQKNIIVLCSSLKEAQTLVKFNEISYQLATKFFPGPLTL
ILKTQTSYLKKTGQKTLGIRIPNHPLALSLLKKYGPLKTTSVNESGKEPLNYYNTIYQMYNNKVGFIYPNDYPILKVAST
IVDATTNKLIVLRQGSISEAEIKKIAKL

Specific function: Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine (Probable) [H]

COG id: COG0009

COG function: function code J; Putative translation factor (SUA5)

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YrdC-like domain [H]

Homologues:

Organism=Escherichia coli, GI87081864, Length=172, Percent_Identity=26.7441860465116, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI2367210, Length=174, Percent_Identity=25.2873563218391, Blast_Score=69, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6321269, Length=197, Percent_Identity=28.4263959390863, Blast_Score=75, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017945
- InterPro:   IPR005145
- InterPro:   IPR004388
- InterPro:   IPR006070
- InterPro:   IPR010923 [H]

Pfam domain/function: PF03481 SUA5; PF01300 Sua5_yciO_yrdC [H]

EC number: NA

Molecular weight: Translated: 21239; Mature: 21239

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS51163 YRDC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNTKPLKNIIIFPTDTVYGMGVSLYDEKGLKEIYQLKKRSLQKNIIVLCSSLKEAQTLV
CCCCCCCCEEEEEECCCHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNEISYQLATKFFPGPLTLILKTQTSYLKKTGQKTLGIRIPNHPLALSLLKKYGPLKTT
HHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCC
SVNESGKEPLNYYNTIYQMYNNKVGFIYPNDYPILKVASTIVDATTNKLIVLRQGSISEA
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHH
EIKKIAKL
HHHHHHCC
>Mature Secondary Structure
MNNTKPLKNIIIFPTDTVYGMGVSLYDEKGLKEIYQLKKRSLQKNIIVLCSSLKEAQTLV
CCCCCCCCEEEEEECCCHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KFNEISYQLATKFFPGPLTLILKTQTSYLKKTGQKTLGIRIPNHPLALSLLKKYGPLKTT
HHHHHHHHHHHHCCCCCEEEEEECHHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCCC
SVNESGKEPLNYYNTIYQMYNNKVGFIYPNDYPILKVASTIVDATTNKLIVLRQGSISEA
CCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCHH
EIKKIAKL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]