Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294261

Identifier: 197294261

GI number: 197294261

Start: 140839

End: 141360

Strand: Direct

Name: 197294261

Synonym: PAa_0124

Alternate gene names: NA

Gene position: 140839-141360 (Clockwise)

Preceding gene: 197294260

Following gene: 197294262

Centisome position: 16.01

GC content: 26.05

Gene sequence:

>522_bases
TTGGTTTATGTTTCCAAGCCCAAAAAATTTCAAAATATTCCACTAACCCGTCAATTAGCATATTTAGGGCTAAACCAATT
TATTGATGGCCTAGATGATAATCAATTTCAATCTCTTTATTTAACTATTTTACAAGGAGATCAAGAATTTTTTGAAAATG
ATGTTTTAAATTGTTCTTTGAAAACAGCAACCACTCCTTTAATTCAAGGAACACTTGATTTTTTATCCCAAAGATTAAAC
CAAAAATTTAATTTAATAATTAATGACTGCAATTCTTTATCTTCGGTTGGTTTGGGTCGCTCGGTTGATTTAAAAATGCA
AAACAACAGTTATCATTTTTTTATCAAAAAATCTAGCGATACTTTAGGTGATGGTTATTGTTTTTTTCATGCCCTTATTT
TTGTATTGCGAGAAAAAGGCTTTATCTTAGAATATATTATAAATATTTCTTTTGATAAGATTGATTTAGTTTCAAATAAT
CAAAAAATAATAAAAAAAATTCAAAAGTACAAACAAATTTAG

Upstream 100 bases:

>100_bases
AAAGAAAATTAAAAATTTTATTATTATTTGTTTTTGTTTTATTTTATTAACTTTTTGTTTTGTGAAGTTTGTGTTTTCAA
AACCTGATACTTCCCCTTCT

Downstream 100 bases:

>100_bases
ATAATAAAAAAGTCAATGAGTAATTTTTTAAGTCTTTCAAAAGAATTGAACCTCAGTTTTTTGCGGGACTTAAAAAATTA
CTCATTGACTTTTATGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVYVSKPKKFQNIPLTRQLAYLGLNQFIDGLDDNQFQSLYLTILQGDQEFFENDVLNCSLKTATTPLIQGTLDFLSQRLN
QKFNLIINDCNSLSSVGLGRSVDLKMQNNSYHFFIKKSSDTLGDGYCFFHALIFVLREKGFILEYIINISFDKIDLVSNN
QKIIKKIQKYKQI

Sequences:

>Translated_173_residues
MVYVSKPKKFQNIPLTRQLAYLGLNQFIDGLDDNQFQSLYLTILQGDQEFFENDVLNCSLKTATTPLIQGTLDFLSQRLN
QKFNLIINDCNSLSSVGLGRSVDLKMQNNSYHFFIKKSSDTLGDGYCFFHALIFVLREKGFILEYIINISFDKIDLVSNN
QKIIKKIQKYKQI
>Mature_173_residues
MVYVSKPKKFQNIPLTRQLAYLGLNQFIDGLDDNQFQSLYLTILQGDQEFFENDVLNCSLKTATTPLIQGTLDFLSQRLN
QKFNLIINDCNSLSSVGLGRSVDLKMQNNSYHFFIKKSSDTLGDGYCFFHALIFVLREKGFILEYIINISFDKIDLVSNN
QKIIKKIQKYKQI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19981; Mature: 19981

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYVSKPKKFQNIPLTRQLAYLGLNQFIDGLDDNQFQSLYLTILQGDQEFFENDVLNCSL
CEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCHHHHHCCCCEEEE
KTATTPLIQGTLDFLSQRLNQKFNLIINDCNSLSSVGLGRSVDLKMQNNSYHFFIKKSSD
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCEEEEEEECCCEEEEEEECCC
TLGDGYCFFHALIFVLREKGFILEYIINISFDKIDLVSNNQKIIKKIQKYKQI
CCCCHHHHHHHHHHHHHCCCCEEEHEECCCCCEEEEECCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVYVSKPKKFQNIPLTRQLAYLGLNQFIDGLDDNQFQSLYLTILQGDQEFFENDVLNCSL
CEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHEEECCCHHHHHCCCCEEEE
KTATTPLIQGTLDFLSQRLNQKFNLIINDCNSLSSVGLGRSVDLKMQNNSYHFFIKKSSD
CCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHCCCCCEEEEEEECCCEEEEEEECCC
TLGDGYCFFHALIFVLREKGFILEYIINISFDKIDLVSNNQKIIKKIQKYKQI
CCCCHHHHHHHHHHHHHCCCCEEEHEECCCCCEEEEECCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA