| Definition | Candidatus Phytoplasma australiense, complete genome. |
|---|---|
| Accession | NC_010544 |
| Length | 879,959 |
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The map label for this gene is 197294248
Identifier: 197294248
GI number: 197294248
Start: 120426
End: 121178
Strand: Direct
Name: 197294248
Synonym: PAa_0111
Alternate gene names: NA
Gene position: 120426-121178 (Clockwise)
Preceding gene: 197294247
Following gene: 197294249
Centisome position: 13.69
GC content: 27.76
Gene sequence:
>753_bases GTGTTTAAAAAAATCATTTATATCATTTTAATAATTATCTTTTTTATTTCAATATTATTTGTATATCATCAAATGAAACC AACTTCCGAAAATTTAATACCCTCTCAAACAACAAATAATTTATTGCCAGCCAAAAATAAAGTTGCTCTTTTGTCAAAAG CGCAAAGAAAGGTTTCCTTAAAACAAGATATATGCGTTTATGAACCTTTTGCTAATCCTAATTTAAAATTTTATGATGAA AATCATCAAGAAATTACTAAATTAGCTGATTTTGACAACCCTTTGCAACGTTGTCTTTTTTTAAACCAACAAAAAGTAGT TTATGGTGAAAACCAAAAAATATTATCTTCTAGATTTTTGAATCCAGATAATACAATAAAATGGGATAGTGATTTGACTT TTAACATGACTTATGATAATGAAAACTATCCTTCAACTAAAAGATCTTTCAATGATAATGGCTCAATCAATTGGCAATCT CCAAACACTTATGACACTACTTATAATCACTCAAATGGCAGAGTCTCTTCTCAAAAAATGTTTAATCTTGATGGCACAGT TAATTGGCAACACCCAGATACTTTTGAACGTTTTTTTAATGAATATGGGTTGCGAATTAAAGAAAGACATTTCAAATCAG ACGGAACAATTGATTGGGCGAACGAAGAAACTTTCGACATCAAACTTGATTCCAAAAATAAATTTCTAAAAACAATTTAT TTTAATGAAAACGGAGAACCTTTACAAAAATAA
Upstream 100 bases:
>100_bases TAAATTCAAAAAAACACCAAGAAATATTATTTTTTTATTCAAAAATTTAAATTTTTAATTTAAATTAAAAATATTTATAT TTAGAAAATAGGATTTTTTA
Downstream 100 bases:
>100_bases TCTTTAATAATTGTAGTTGGCAAATGTTTTTAGAAAAGATAGAAAAATAATTATTTTTTAGTTTTGAGCGCAAAAAAAGA CCGACTAAAAAATAAGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MFKKIIYIILIIIFFISILFVYHQMKPTSENLIPSQTTNNLLPAKNKVALLSKAQRKVSLKQDICVYEPFANPNLKFYDE NHQEITKLADFDNPLQRCLFLNQQKVVYGENQKILSSRFLNPDNTIKWDSDLTFNMTYDNENYPSTKRSFNDNGSINWQS PNTYDTTYNHSNGRVSSQKMFNLDGTVNWQHPDTFERFFNEYGLRIKERHFKSDGTIDWANEETFDIKLDSKNKFLKTIY FNENGEPLQK
Sequences:
>Translated_250_residues MFKKIIYIILIIIFFISILFVYHQMKPTSENLIPSQTTNNLLPAKNKVALLSKAQRKVSLKQDICVYEPFANPNLKFYDE NHQEITKLADFDNPLQRCLFLNQQKVVYGENQKILSSRFLNPDNTIKWDSDLTFNMTYDNENYPSTKRSFNDNGSINWQS PNTYDTTYNHSNGRVSSQKMFNLDGTVNWQHPDTFERFFNEYGLRIKERHFKSDGTIDWANEETFDIKLDSKNKFLKTIY FNENGEPLQK >Mature_250_residues MFKKIIYIILIIIFFISILFVYHQMKPTSENLIPSQTTNNLLPAKNKVALLSKAQRKVSLKQDICVYEPFANPNLKFYDE NHQEITKLADFDNPLQRCLFLNQQKVVYGENQKILSSRFLNPDNTIKWDSDLTFNMTYDNENYPSTKRSFNDNGSINWQS PNTYDTTYNHSNGRVSSQKMFNLDGTVNWQHPDTFERFFNEYGLRIKERHFKSDGTIDWANEETFDIKLDSKNKFLKTIY FNENGEPLQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29533; Mature: 29533
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIIYIILIIIFFISILFVYHQMKPTSENLIPSQTTNNLLPAKNKVALLSKAQRKVSL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KQDICVYEPFANPNLKFYDENHQEITKLADFDNPLQRCLFLNQQKVVYGENQKILSSRFL HCCCEEECCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHHCC NPDNTIKWDSDLTFNMTYDNENYPSTKRSFNDNGSINWQSPNTYDTTYNHSNGRVSSQKM CCCCCEEECCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCEE FNLDGTVNWQHPDTFERFFNEYGLRIKERHFKSDGTIDWANEETFDIKLDSKNKFLKTIY EECCCEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCCCEEEEEECCCCCEEEEEE FNENGEPLQK ECCCCCCCCC >Mature Secondary Structure MFKKIIYIILIIIFFISILFVYHQMKPTSENLIPSQTTNNLLPAKNKVALLSKAQRKVSL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH KQDICVYEPFANPNLKFYDENHQEITKLADFDNPLQRCLFLNQQKVVYGENQKILSSRFL HCCCEEECCCCCCCEEEEECCHHHHHHHHCCCCHHHHHHHCCCCEEEECCCHHHHHHHCC NPDNTIKWDSDLTFNMTYDNENYPSTKRSFNDNGSINWQSPNTYDTTYNHSNGRVSSQKM CCCCCEEECCCEEEEEEECCCCCCCHHCCCCCCCEEEECCCCCCCCEEECCCCCCCCCEE FNLDGTVNWQHPDTFERFFNEYGLRIKERHFKSDGTIDWANEETFDIKLDSKNKFLKTIY EECCCEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCCCEEEEEECCCCCEEEEEE FNENGEPLQK ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA