Definition Candidatus Phytoplasma australiense, complete genome.
Accession NC_010544
Length 879,959

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The map label for this gene is 197294196

Identifier: 197294196

GI number: 197294196

Start: 42546

End: 43178

Strand: Direct

Name: 197294196

Synonym: PAa_0038

Alternate gene names: NA

Gene position: 42546-43178 (Clockwise)

Preceding gene: 197294195

Following gene: 197294197

Centisome position: 4.83

GC content: 25.12

Gene sequence:

>633_bases
ATGAAACAAATATCTAATTTAGATTTTAATAATATTAACGTTTTTAATCATAAATCTTTGTGCGTTAACATAACCAAACA
AATAGTTCAACCAATTTTTTTCAATAAAGCTTTTAATCAGTATATGTTTGATTGCCATAATATACTCAATGAATATTTAA
CCAACAACCAATACAACTCTCAAAGTCAAAAATCAATTCGTGGTAAAATTAACGAATACTTAATTTTGCTTTATCTAAAT
CACAAAGGAATTAAGTATTTATACCCTCAATCATATTTATTTTTCATCCCTGATATTAAATTTGATTTAGTATTGTTTAC
TAAAAGAAAACGAATTATTGCCTTCAATTTCAAAACTTGCCTTAGAGATAGATACAAACAATCAATAGTAGAAGGGGAAC
AAATCAAAAAACTAGACACTCGCTTTGAGTTTTATTTGTTAACAAATGATGAATCCGAAACTCAAAGATTAAATAATAAA
ATTAAAAATGGTAAAGTACAATCAATTAACAAAGTAATCAATTTATTTTCCAATTCAGCTAATCTCTTCTTACAAAACTT
ACTAACCAACCAATTCATTCCCTTTTCACCTATTAATTTAATTAAAAAGATGGTTCGCCCTAATGACAAATAA

Upstream 100 bases:

>100_bases
AAAAACCGTAGCGGTCAATTAGGCGAATGTAGTTTTAATTTTTATAAACAAATCCAAAGATTTGAAGAAAAAAAATAAGA
ATAAAAAAGGAAATAAAAAT

Downstream 100 bases:

>100_bases
ATTAATTAGTTTTGAAGGTATTGACGGAAGTGGCAAAACTACTTTAATTAACGAATTAAAAGCTTTTTTTGAAAATAAAG
GCTATAAAACCAAAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN
HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK
IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK

Sequences:

>Translated_210_residues
MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN
HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK
IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK
>Mature_210_residues
MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNSQSQKSIRGKINEYLILLYLN
HKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTCLRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNK
IKNGKVQSINKVINLFSNSANLFLQNLLTNQFIPFSPINLIKKMVRPNDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25059; Mature: 25059

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNS
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTC
HHHHHHHHCCCEEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH
LRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNKIKNGKVQSINKVINLFSNSA
HHHHHHHHHHCHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
NLFLQNLLTNQFIPFSPINLIKKMVRPNDK
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MKQISNLDFNNINVFNHKSLCVNITKQIVQPIFFNKAFNQYMFDCHNILNEYLTNNQYNS
CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
QSQKSIRGKINEYLILLYLNHKGIKYLYPQSYLFFIPDIKFDLVLFTKRKRIIAFNFKTC
HHHHHHHHCCCEEEEEEEECCCCEEEECCCCEEEEECCCCEEEEEEECCCEEEEECHHHH
LRDRYKQSIVEGEQIKKLDTRFEFYLLTNDESETQRLNNKIKNGKVQSINKVINLFSNSA
HHHHHHHHHHCHHHHHHHHCEEEEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHH
NLFLQNLLTNQFIPFSPINLIKKMVRPNDK
HHHHHHHHHCCCCCCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA