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The map label for this gene is ykrA [H]

Identifier: 197294178

GI number: 197294178

Start: 12270

End: 13058

Strand: Reverse

Name: ykrA [H]

Synonym: PAa_0010

Alternate gene names: 197294178

Gene position: 13058-12270 (Counterclockwise)

Preceding gene: 197294184

Following gene: 197294177

Centisome position: 1.48

GC content: 24.59

Gene sequence:

>789_bases
ATGAAAAAATTAATTTTTTTTGATATCGACGGAACTTTAAGAAGCAACGAAAAAAAAACTATTGGCAGACAAACTCAAAA
ATTAATTAATCAATTAGCTCAAAATCCCAATGTAACATTAGGAATTGCCACCGGAAGAAATTACGGAAGGCTTGATGTTT
TAAAAGGGATAAGACATTTATTTAAATATTGGGTGCTATCCAATGGAGCTTTAACTATGATTGAAGATAAAATAATTGAT
GAAGTTGAATTTAGTCAACAAATTATATTAAAAATACAAAAAGAAATGGAAAAAATCGGAGCATTAATGCACCTTTATAG
TTTAGAACACATTTTTGAAGTTCCAACTTCTAAAAACAACTTTCATAATATGAGTGATTTTGAAAATGTAAAACAAGTCG
CTTTAACAAAAGATTTTTATTTACAAAATAAAATATATCAAATATCTTTGTTGTATCAAAAAGATTCACAAAAAACACAA
ATTAAAAATTTTTTAGCTAAAAACAAAGAATTAAAAGCTTATTTTTGGGAAGGTGGTTATATCGATTTAATGTATCAACA
AATTGATAAATCATACGGAATCAAAAAAATTAAAAAATTATTTCCCAATCATCAATTAATTTGTATGGGTGATGGTCCAA
ATGATTTAGAAATGTTAAAATTAGCAGATATTGCTATTACTATGGGAAACACAAAAATAGAAGAATTAAAAGAAATTTCA
AACCTTATAACTCCTCATATTGATGAAGATCGTATATATGATTTTTTTAAACAAAGTAATTTAATTTAA

Upstream 100 bases:

>100_bases
TTATAGTATAATATAAACAAATAATTGTAATTTATTTTTTTCTAAATGAAAAAATTAAAAAAATTATATAATTTAAAATA
GAATAGGTGATGAATTTTTT

Downstream 100 bases:

>100_bases
TTTGTTTAAAAGAAGTTTTATGGAAGAATTAAAATTATTTCAGCATCCCAATCCATTAATTTGTATGGGTGATGATCCAA
ATGATTTAGAAATGTTAAAA

Product: Putative hydrolases of the haloacid dehalogenase-like (HAD) superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKKLIFFDIDGTLRSNEKKTIGRQTQKLINQLAQNPNVTLGIATGRNYGRLDVLKGIRHLFKYWVLSNGALTMIEDKIID
EVEFSQQIILKIQKEMEKIGALMHLYSLEHIFEVPTSKNNFHNMSDFENVKQVALTKDFYLQNKIYQISLLYQKDSQKTQ
IKNFLAKNKELKAYFWEGGYIDLMYQQIDKSYGIKKIKKLFPNHQLICMGDGPNDLEMLKLADIAITMGNTKIEELKEIS
NLITPHIDEDRIYDFFKQSNLI

Sequences:

>Translated_262_residues
MKKLIFFDIDGTLRSNEKKTIGRQTQKLINQLAQNPNVTLGIATGRNYGRLDVLKGIRHLFKYWVLSNGALTMIEDKIID
EVEFSQQIILKIQKEMEKIGALMHLYSLEHIFEVPTSKNNFHNMSDFENVKQVALTKDFYLQNKIYQISLLYQKDSQKTQ
IKNFLAKNKELKAYFWEGGYIDLMYQQIDKSYGIKKIKKLFPNHQLICMGDGPNDLEMLKLADIAITMGNTKIEELKEIS
NLITPHIDEDRIYDFFKQSNLI
>Mature_262_residues
MKKLIFFDIDGTLRSNEKKTIGRQTQKLINQLAQNPNVTLGIATGRNYGRLDVLKGIRHLFKYWVLSNGALTMIEDKIID
EVEFSQQIILKIQKEMEKIGALMHLYSLEHIFEVPTSKNNFHNMSDFENVKQVALTKDFYLQNKIYQISLLYQKDSQKTQ
IKNFLAKNKELKAYFWEGGYIDLMYQQIDKSYGIKKIKKLFPNHQLICMGDGPNDLEMLKLADIAITMGNTKIEELKEIS
NLITPHIDEDRIYDFFKQSNLI

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 30593; Mature: 30593

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLIFFDIDGTLRSNEKKTIGRQTQKLINQLAQNPNVTLGIATGRNYGRLDVLKGIRHL
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
FKYWVLSNGALTMIEDKIIDEVEFSQQIILKIQKEMEKIGALMHLYSLEHIFEVPTSKNN
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FHNMSDFENVKQVALTKDFYLQNKIYQISLLYQKDSQKTQIKNFLAKNKELKAYFWEGGY
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCC
IDLMYQQIDKSYGIKKIKKLFPNHQLICMGDGPNDLEMLKLADIAITMGNTKIEELKEIS
HHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEEEEECCCHHHHHHHHH
NLITPHIDEDRIYDFFKQSNLI
HHHCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MKKLIFFDIDGTLRSNEKKTIGRQTQKLINQLAQNPNVTLGIATGRNYGRLDVLKGIRHL
CCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHH
FKYWVLSNGALTMIEDKIIDEVEFSQQIILKIQKEMEKIGALMHLYSLEHIFEVPTSKNN
HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
FHNMSDFENVKQVALTKDFYLQNKIYQISLLYQKDSQKTQIKNFLAKNKELKAYFWEGGY
CCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHHHHHCCCCEEEEEECCCC
IDLMYQQIDKSYGIKKIKKLFPNHQLICMGDGPNDLEMLKLADIAITMGNTKIEELKEIS
HHHHHHHHHHHCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHEEEEECCCHHHHHHHHH
NLITPHIDEDRIYDFFKQSNLI
HHHCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]