| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheA-4 [H]
Identifier: 197120303
GI number: 197120303
Start: 4479056
End: 4480867
Strand: Direct
Name: cheA-4 [H]
Synonym: Gbem_3942
Alternate gene names: 197120303
Gene position: 4479056-4480867 (Clockwise)
Preceding gene: 197120302
Following gene: 197120304
Centisome position: 97.05
GC content: 62.36
Gene sequence:
>1812_bases ATGGCTATAGACTGCGAAGATCAGGAGCTACTCGAAGGTTTCCTTGCGGAAACCACGGAACTCCTCGAAAAACTTGACGA CGACCTGATCACCTTGGAGAAGAGCCCGGACGACGCCGAACTGATGAATCGGATCTTCCGCTCCATCCACACGGTCAAAG GGGCCTCCAGCTTCCTCGGGTTCGACATGCTGGTCAAAGTGACTCACAAGACCGAGGATGTGCTGAACCGCCTGAGAAAG GGGGAGCTCTTCCTCAACCCAGAGATCATGGACGTGATCCTGGAGGCGGTCGACCTGGTGAAGACACTGGTGGCCGACAT CAAGGGAGGGGATATCGTCGAGAGGGACCTCGAGGGGACCATCTCCAAGCTGATTCCGTTTCTCTCCGAGAACGCGACCG AAGCTACGGTGCTCGCCCCTACCTCGGCTCCCAAGGAGGAGAAGGTCGCGACGCCTCCTCCCCCCGAGTCAGCCGCGGAT GCAGAAGCGAAAGCAGCCGGTGAGAAGGAGAGCGCACCCGCCGATACCGGTGCGCCCACAACGGCAGCCGCGGCGCCGGT GGCGCAGCCCAAGCCTCAGCCGGTCAAGGAGCCGCAAAAGCCTGCCCCCAAAGGGGAGGAGCTGGCCGACAACTCCACCG TGCGCGTCGACGTGAAGCGCCTGGACGACCTGATGAACCAGGTCGGCGAGCTGGTGCTCGAGCGCAACCGGATGATCCAG CTGCACAGCGACTACCAGACGGGTCTCGACCCCACCGGCTTCGGCGATGATTTCGGGAAACTCTCCAAGAGGCTCAACTT CGTCACCTCCGAGCTGCAGATGCAGGTTCTCAAGATGCGGATGCTGCCGGTGGAGAAGGTCTTCAAGAAGTTCCCGCGCA TCGTCAGGAATCTGGCGCGCGACCTCGGCAAGGAAGTGGACTTGGTCATCATCGGCGAGGAGACCGAACTCGACCGCTCC GTCGTCGACGAGATCGGGGACCCCTTGATCCACCTGATCCGCAACGCCCTGGACCACGGCCTGGAAACTCCGGACCAGCG CCTTTCCGCCGGCAAGGACCGCACCGGCACCGTGGTCCTCTCCGCCGCCCACGAGGGGAACCAGATCGTCATCAGCATCA AGGACGACGGCCGGGGCATAGACCCCGAGCGGATCTCGAAGAAGGCGCTGGAGAAGGGGCTCGTCACCGAGGAACAGCTC GCTTCCATGGGGAACCGCGAGATCCTCGACCTCCTCTTCCTCCCGGGCTTCTCGACCAAGGAGCAGACCACCGACCTCTC CGGCCGCGGCGTCGGCATGGACGTGGTGCGCACCAACATCAGGAAGTTAAACGGCATCATCGAGATCAAAAACGACGTCG GGCACGGCACCGAGTTCATACTGAAGCTCCCGCTCACCCTGGCCATCATCCAGTCCCTGCTGGTGGAGGTGGAGAAGGAG GTCTACTCCATACCGCTTGCGTCGGTCATCGAGACCATGCGGGTGAGCAAGAGCGAGTTCCACATGATCGGCGGACAGGA AGTGCTCAAATTGAGGGACTCGGTGCTCCCGCTCCTGCGGCTGCAACAGACCTTCAGCTGCCAGGAGGTCTACACCGATC GCGACACCTGCTACGTGGTCATAGTCGGCGTAGCCGAGAAGCGCATCGGCCTCATCGTCACCAGGCTCCTGGGGCAGCAG GAGGTCGCCATCAAGTCGCTGGGCAAGTTCCTGGCCAATCTTCCTGGCATCGGCGGTTCAACCATCATGGGCGACGGGCG GGTGGCACTGATCGTGGATCCGATCGGTCTGATCGGGGGCGGGGCAGCCTGA
Upstream 100 bases:
>100_bases CGACTTGGAGCGGATGTTCTCCGCCGACGAGCGCAGGCTGTTCAGCAACGTAGGTTAAGGTACCAACAGGGGAAAGCCTT CCCCCTTCCCGGAGCGCATC
Downstream 100 bases:
>100_bases GGGGAAGATAATGGCATTAGACATGAAACCATTCGACGCGAAAGCGGCCCCGAAGATCAACGAAAAGGACTTCGAGCAGC TTCGGGACTATATATATAAC
Product: chemotaxis sensor histidine kinase CheA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 603; Mature: 602
Protein sequence:
>603_residues MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLGFDMLVKVTHKTEDVLNRLRK GELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGTISKLIPFLSENATEATVLAPTSAPKEEKVATPPPPESAAD AEAKAAGEKESAPADTGAPTTAAAAPVAQPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQ LHSDYQTGLDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDLVIIGEETELDRS VVDEIGDPLIHLIRNALDHGLETPDQRLSAGKDRTGTVVLSAAHEGNQIVISIKDDGRGIDPERISKKALEKGLVTEEQL ASMGNREILDLLFLPGFSTKEQTTDLSGRGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKE VYSIPLASVIETMRVSKSEFHMIGGQEVLKLRDSVLPLLRLQQTFSCQEVYTDRDTCYVVIVGVAEKRIGLIVTRLLGQQ EVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPIGLIGGGAA
Sequences:
>Translated_603_residues MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLGFDMLVKVTHKTEDVLNRLRK GELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGTISKLIPFLSENATEATVLAPTSAPKEEKVATPPPPESAAD AEAKAAGEKESAPADTGAPTTAAAAPVAQPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQ LHSDYQTGLDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDLVIIGEETELDRS VVDEIGDPLIHLIRNALDHGLETPDQRLSAGKDRTGTVVLSAAHEGNQIVISIKDDGRGIDPERISKKALEKGLVTEEQL ASMGNREILDLLFLPGFSTKEQTTDLSGRGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKE VYSIPLASVIETMRVSKSEFHMIGGQEVLKLRDSVLPLLRLQQTFSCQEVYTDRDTCYVVIVGVAEKRIGLIVTRLLGQQ EVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPIGLIGGGAA >Mature_602_residues AIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLGFDMLVKVTHKTEDVLNRLRKG ELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGTISKLIPFLSENATEATVLAPTSAPKEEKVATPPPPESAADA EAKAAGEKESAPADTGAPTTAAAAPVAQPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQL HSDYQTGLDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLARDLGKEVDLVIIGEETELDRSV VDEIGDPLIHLIRNALDHGLETPDQRLSAGKDRTGTVVLSAAHEGNQIVISIKDDGRGIDPERISKKALEKGLVTEEQLA SMGNREILDLLFLPGFSTKEQTTDLSGRGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKEV YSIPLASVIETMRVSKSEFHMIGGQEVLKLRDSVLPLLRLQQTFSCQEVYTDRDTCYVVIVGVAEKRIGLIVTRLLGQQE VAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPIGLIGGGAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. CheA is autophosphorylated; it can transfer its phosphate group to either CheB or CheY [H]
COG id: COG0643
COG function: function code NT; Chemotaxis protein histidine kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HPt domain [H]
Homologues:
Organism=Escherichia coli, GI1788197, Length=652, Percent_Identity=35.5828220858896, Blast_Score=372, Evalue=1e-104,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002545 - InterPro: IPR015162 - InterPro: IPR004358 - InterPro: IPR008207 - InterPro: IPR004105 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF01584 CheW; PF09078 CheY-binding; PF02895 H-kinase_dim; PF02518 HATPase_c; PF01627 Hpt [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 65753; Mature: 65621
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS50851 CHEW ; PS50894 HPT ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLG CCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH FDMLVKVTHKTEDVLNRLRKGELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGT HHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ISKLIPFLSENATEATVLAPTSAPKEEKVATPPPPESAADAEAKAAGEKESAPADTGAPT HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC TAAAAPVAQPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEE LHSDYQTGLDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLAR EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DLGKEVDLVIIGEETELDRSVVDEIGDPLIHLIRNALDHGLETPDQRLSAGKDRTGTVVL HCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEE SAAHEGNQIVISIKDDGRGIDPERISKKALEKGLVTEEQLASMGNREILDLLFLPGFSTK EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCCCC EQTTDLSGRGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKE CCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VYSIPLASVIETMRVSKSEFHMIGGQEVLKLRDSVLPLLRLQQTFSCQEVYTDRDTCYVV HHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEE IVGVAEKRIGLIVTRLLGQQEVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPIGLIGG EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCHHCCCC GAA CCC >Mature Secondary Structure AIDCEDQELLEGFLAETTELLEKLDDDLITLEKSPDDAELMNRIFRSIHTVKGASSFLG CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCHHHHHH FDMLVKVTHKTEDVLNRLRKGELFLNPEIMDVILEAVDLVKTLVADIKGGDIVERDLEGT HHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH ISKLIPFLSENATEATVLAPTSAPKEEKVATPPPPESAADAEAKAAGEKESAPADTGAPT HHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCC TAAAAPVAQPKPQPVKEPQKPAPKGEELADNSTVRVDVKRLDDLMNQVGELVLERNRMIQ CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEE LHSDYQTGLDPTGFGDDFGKLSKRLNFVTSELQMQVLKMRMLPVEKVFKKFPRIVRNLAR EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH DLGKEVDLVIIGEETELDRSVVDEIGDPLIHLIRNALDHGLETPDQRLSAGKDRTGTVVL HCCCCCCEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCEEEE SAAHEGNQIVISIKDDGRGIDPERISKKALEKGLVTEEQLASMGNREILDLLFLPGFSTK EECCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHCCCCCCC EQTTDLSGRGVGMDVVRTNIRKLNGIIEIKNDVGHGTEFILKLPLTLAIIQSLLVEVEKE CCCCCCCCCCCCHHHHHHHHHHHHCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VYSIPLASVIETMRVSKSEFHMIGGQEVLKLRDSVLPLLRLQQTFSCQEVYTDRDTCYVV HHHCCHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEE IVGVAEKRIGLIVTRLLGQQEVAIKSLGKFLANLPGIGGSTIMGDGRVALIVDPIGLIGG EEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEECCCEEEEEECCHHCCCC GAA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2002011; 9097040; 9278503; 3510184; 2832069; 2068106; 8555213; 8639521; 9020767; 9437425; 9636149 [H]