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The map label for this gene is atpE

Identifier: 197120293

GI number: 197120293

Start: 4469710

End: 4469985

Strand: Direct

Name: atpE

Synonym: Gbem_3932

Alternate gene names: 197120293

Gene position: 4469710-4469985 (Clockwise)

Preceding gene: 197120292

Following gene: 197120294

Centisome position: 96.85

GC content: 56.88

Gene sequence:

>276_bases
ATGGAATTCTTTACTATGTGTGTACTCGCAGCAGGCATCGGCATGGCTCTCGGCACCCTCGGCACCGGCATCGGTCAGGG
TCTCGCAGTTAAGAGCGCAGTTGAAGGCACCTCCCGTAACCCCGGTGCATCCGGCAAGATCCTCACCACCATGATGATCG
GTCTGGCGATGATCGAGTCCCTCGCTATCTACGCCCTGGTTGTCTGCCTCATCATCCTCTTCGCTAACCCCTACAAGGAC
ATCGCCCTCGAACTGGCGAAATCCGTAGCGAAGTAA

Upstream 100 bases:

>100_bases
CCCTCGATCTTTGTCCGGTTTCCTCAATCTTAGTCTTAATCTCAATCTGATTTTTAATTCCTATACTGTTTAGGAAAAAT
ACGCAGCAAAGGAGAAACAA

Downstream 100 bases:

>100_bases
TTTCTTCTTCGAAGAGATAAAAAGGGGCGCGCCGCAAGGCGCGCCCTTTTTTGTTGCCTCCACCTTCGCTGAAGCTGCCT
CGGACAAAAACCTGCCTGAC

Product: ATP synthase F0 subunit C

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit c; F-type ATPase subunit c; F-ATPase subunit c; Lipid-binding protein

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MEFFTMCVLAAGIGMALGTLGTGIGQGLAVKSAVEGTSRNPGASGKILTTMMIGLAMIESLAIYALVVCLIILFANPYKD
IALELAKSVAK

Sequences:

>Translated_91_residues
MEFFTMCVLAAGIGMALGTLGTGIGQGLAVKSAVEGTSRNPGASGKILTTMMIGLAMIESLAIYALVVCLIILFANPYKD
IALELAKSVAK
>Mature_91_residues
MEFFTMCVLAAGIGMALGTLGTGIGQGLAVKSAVEGTSRNPGASGKILTTMMIGLAMIESLAIYALVVCLIILFANPYKD
IALELAKSVAK

Specific function: Key component of the F(0) channel; it plays a direct role in translocation across the membrane. A homomeric c-ring of between 10-14 subunits forms the central stalk rotor element with the F(1) delta and epsilon subunits

COG id: COG0636

COG function: function code C; F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase C chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPL_GEOBB (B5EFG9)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002140720.1
- ProteinModelPortal:   B5EFG9
- GeneID:   6780796
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_3932
- HOGENOM:   HBG753983
- OMA:   VEGVSRN
- ProtClustDB:   CLSK827756
- HAMAP:   MF_01396
- InterPro:   IPR000454
- InterPro:   IPR005953
- InterPro:   IPR020537
- InterPro:   IPR002379
- Gene3D:   G3DSA:1.20.20.10
- PRINTS:   PR00124
- TIGRFAMs:   TIGR01260

Pfam domain/function: PF00137 ATP-synt_C; SSF81333 ATPase_F0/V0_c

EC number: 3.6.3.14

Molecular weight: Translated: 9323; Mature: 9323

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: PS00605 ATPASE_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10a874ec)-; HASH(0x114355cc)-;

Cys/Met content:

2.2 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFTMCVLAAGIGMALGTLGTGIGQGLAVKSAVEGTSRNPGASGKILTTMMIGLAMIES
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LAIYALVVCLIILFANPYKDIALELAKSVAK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCH
>Mature Secondary Structure
MEFFTMCVLAAGIGMALGTLGTGIGQGLAVKSAVEGTSRNPGASGKILTTMMIGLAMIES
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH
LAIYALVVCLIILFANPYKDIALELAKSVAK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA