Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197120235

Identifier: 197120235

GI number: 197120235

Start: 4410605

End: 4411486

Strand: Direct

Name: 197120235

Synonym: Gbem_3874

Alternate gene names: NA

Gene position: 4410605-4411486 (Clockwise)

Preceding gene: 197120231

Following gene: 197120236

Centisome position: 95.57

GC content: 63.15

Gene sequence:

>882_bases
ATGGAAAGAAGAAGTTTCATCAAGCTGCTCGGTCTTTGCTCGATCTTGCTGCCCGGTTCGCTGCGGGAACTTTTCGCCGC
CCAAGGTCCGGTGGTAGCCGTTTCCCAAGGAAGCGACCACGCAGCCGCCGCGCGCAAGGCGATCGCCGCGCTGGGGGGGA
TGCAGCGCTTCGTCAAGGCGGGGCAGACCGTCGTGGTCAAACCGAACATCGGCTGGGACCGGACGCCGGAATTCGCCGCC
ACCACCAATCCGGCCGTAGTGAAAGCCCTCGTCGAGGAGTGCCTGAAGGCGGGGGCCAAGAAGGTAAAGGTCTTCGACCG
TACCTGCAACGACGCCCGTCGCTGCTACGCCAGCAGCGGCATCGAGGCGGCACTGAAGGGAATGGAAAACGTCGAGGTAA
AGCACCTGGAAGAGGAGCGCTTCAAGAAGGTGGCGTTGAACGGCAAGGCGCTCAAGGATTGCGAACTCTATGGCGAGGCG
CTCTCCGCCGACGTCTACATCAACGTCCCGGTGGCAAAGCACCACGGACTGAGCCGCCTCACCCTGGGGATGAAGAACGT
GATGGGGATCATGGGGGGCAACCGCGGCTCGATCCACAAGAACCTCGACCAGGCGCTGGCAGACGTGAACAGCTACTTCA
AGCCCCAGCTCACCGTGATAGACGCCACCAGGATACTCACCGCCCACGGCCCCCAAGGGGGGAACCTGGCAGACGTCAAG
GTCCTGAACCAGGTGATCGCCTCCACCGACATGGTCGCGGCCGACGCCTATGCCACCACGCTCTTCGGTTTGAAGCCCTC
CGACATCGCCGTCACCAGGACGGCCTACCAGCGCGGGCTGGGGGAGATGAACCTGGACCGGATCAGGGTGGTCAAGGCAT
GA

Upstream 100 bases:

>100_bases
CACATGAGGCCAAGCATTTTTTCCGCCCGGATTGTCATGGCGCGATTTGTTCCTATAATGAGAGCTGGAAAAAATCACGC
CAACCTGCTCCGGAGGCTCT

Downstream 100 bases:

>100_bases
AGTTTCCGCGCCCCCCCCGCATCTCGCAGCTTTTCTTCCTCCTCCTCTTCCTGATCCTTTTCCTGATGACCGAGTACCGC
GGCAGCGACCGGATCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MERRSFIKLLGLCSILLPGSLRELFAAQGPVVAVSQGSDHAAAARKAIAALGGMQRFVKAGQTVVVKPNIGWDRTPEFAA
TTNPAVVKALVEECLKAGAKKVKVFDRTCNDARRCYASSGIEAALKGMENVEVKHLEEERFKKVALNGKALKDCELYGEA
LSADVYINVPVAKHHGLSRLTLGMKNVMGIMGGNRGSIHKNLDQALADVNSYFKPQLTVIDATRILTAHGPQGGNLADVK
VLNQVIASTDMVAADAYATTLFGLKPSDIAVTRTAYQRGLGEMNLDRIRVVKA

Sequences:

>Translated_293_residues
MERRSFIKLLGLCSILLPGSLRELFAAQGPVVAVSQGSDHAAAARKAIAALGGMQRFVKAGQTVVVKPNIGWDRTPEFAA
TTNPAVVKALVEECLKAGAKKVKVFDRTCNDARRCYASSGIEAALKGMENVEVKHLEEERFKKVALNGKALKDCELYGEA
LSADVYINVPVAKHHGLSRLTLGMKNVMGIMGGNRGSIHKNLDQALADVNSYFKPQLTVIDATRILTAHGPQGGNLADVK
VLNQVIASTDMVAADAYATTLFGLKPSDIAVTRTAYQRGLGEMNLDRIRVVKA
>Mature_293_residues
MERRSFIKLLGLCSILLPGSLRELFAAQGPVVAVSQGSDHAAAARKAIAALGGMQRFVKAGQTVVVKPNIGWDRTPEFAA
TTNPAVVKALVEECLKAGAKKVKVFDRTCNDARRCYASSGIEAALKGMENVEVKHLEEERFKKVALNGKALKDCELYGEA
LSADVYINVPVAKHHGLSRLTLGMKNVMGIMGGNRGSIHKNLDQALADVNSYFKPQLTVIDATRILTAHGPQGGNLADVK
VLNQVIASTDMVAADAYATTLFGLKPSDIAVTRTAYQRGLGEMNLDRIRVVKA

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007160 [H]

Pfam domain/function: PF04015 DUF362 [H]

EC number: NA

Molecular weight: Translated: 31428; Mature: 31428

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRSFIKLLGLCSILLPGSLRELFAAQGPVVAVSQGSDHAAAARKAIAALGGMQRFVKA
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GQTVVVKPNIGWDRTPEFAATTNPAVVKALVEECLKAGAKKVKVFDRTCNDARRCYASSG
CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCC
IEAALKGMENVEVKHLEEERFKKVALNGKALKDCELYGEALSADVYINVPVAKHHGLSRL
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHCCCHHH
TLGMKNVMGIMGGNRGSIHKNLDQALADVNSYFKPQLTVIDATRILTAHGPQGGNLADVK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHEEEEEECCCCCCCCHHHH
VLNQVIASTDMVAADAYATTLFGLKPSDIAVTRTAYQRGLGEMNLDRIRVVKA
HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHEEHHHHHCCCCCCCCCCEEEECC
>Mature Secondary Structure
MERRSFIKLLGLCSILLPGSLRELFAAQGPVVAVSQGSDHAAAARKAIAALGGMQRFVKA
CCHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
GQTVVVKPNIGWDRTPEFAATTNPAVVKALVEECLKAGAKKVKVFDRTCNDARRCYASSG
CCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCC
IEAALKGMENVEVKHLEEERFKKVALNGKALKDCELYGEALSADVYINVPVAKHHGLSRL
HHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEECCHHHHCCCHHH
TLGMKNVMGIMGGNRGSIHKNLDQALADVNSYFKPQLTVIDATRILTAHGPQGGNLADVK
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHEEEEEECCCCCCCCHHHH
VLNQVIASTDMVAADAYATTLFGLKPSDIAVTRTAYQRGLGEMNLDRIRVVKA
HHHHHHHHCCHHHHHHHHHHHCCCCCCCHHEEHHHHHCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]