Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119438

Identifier: 197119438

GI number: 197119438

Start: 3552863

End: 3554035

Strand: Direct

Name: 197119438

Synonym: Gbem_3067

Alternate gene names: NA

Gene position: 3552863-3554035 (Clockwise)

Preceding gene: 197119437

Following gene: 197119439

Centisome position: 76.98

GC content: 50.9

Gene sequence:

>1173_bases
ATGTCGACGCTTCCACCTTACCAAATCCCAACTAGCATGGCAGAGTCTGTAACACGCCATGCGCAAAACCCACCTATATC
AGAATCTCTCTTTCTCTCCTGCGGTATCGACACGCTCGACCTTGGGCTGTATGTCTCCTGGGACACCAGATGGAACTCCA
CAAAGGCAGGCCTTGAGGATAAAAAGTCTGCTGCACAACAGACGACCGAACTTCTCGACCAGACAGACATAGGAAGAGAA
TTTCTGCATCATCCGAGCGGCAAGGCTCCTAATTACCGCTATCAACTGCACTTCCCTGAATATCGCGTATACATCGCCAT
TTCCGACAAGCCCGGCAAATCCCCTAATGTCTATGTCACCATAAAGGCAGAAACCCTCTGGCACGTTGAGTTCCCTACAA
TACTTGAACTCTTGGAGTTCGACCTCGACAGCTTCGGCGGAACAATCGAGCGCATCCAACCTAGCAGGGTTGACTTGTGC
GCGGACTTCAGAATCAATCCGCCACCCACATTGCAATTCATACAACAGCATCGGGTGTCGCGTAGCACCATGATACGCCC
CTACCTGAGCGGCGAGACCCTGGAAACATTCTATTCTGGCTCGCCATCCTCACCGGTTCAAATCCGCATCTATGACAAGG
GCAAGGAAATCCTGAAAACCAACAAACAATGGTTCCTTCCCATTTGGGGAGTAGATACGCCTGAAGGCGTTTGGCGAGTT
GAATTCCAATTGCGGCGTACATTTCTCCACCAATACAGGATCAAGACCATAGAAGACCTGTGGGGCAAGATCGGGACCAT
ATGGGAGTACCTGACTGCGGAATGGTTCTCATTGAGACTCCCCGACAACGAGAAGGCAGAACGGCGAACCATTCATCCCT
GGTGGTTATTAGTCCAGGAATGCAGTGAGCGATTCGGGGGGATGAGCGAGGTAAGACGCACATACACCACTGACACGGTA
GAGCCTATTCAGAAGACACTTGCTCATATCTGCGGACGGCTCGTTTCCATAGCTGCGCAAGAAGGCATTAAGGATAGGAT
GAAAGCCATTCTGCACCTGGAGGAACTTATCTACCAACGGATGGATGAAGAAAAATTCCGAAGCGAGTACAAGAAGAAGG
CGATAAAGCTCGGTTATCGCGGTGAGTTGGGAGGGGCAGAATATGAGGGGTGA

Upstream 100 bases:

>100_bases
GGCCCCATCACCTACTCACGCCTTGTAGCTAGCCATTCCCTCTATGGGTGAAGCAAGCCATTGGCAATTTCCATGTGCTT
ATGCACAGAAGGAGTTGTTT

Downstream 100 bases:

>100_bases
TCCTGAACTGCTGACCGTGGAGGAATTTGCCAAACGGATGAAGGTATCCAGAACAACGGTATTCGGATGGCTGAAAAGTG
GGGTTCTCAGTGAAGGGGTG

Product: plasmid replication initiation factor-like protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 389

Protein sequence:

>390_residues
MSTLPPYQIPTSMAESVTRHAQNPPISESLFLSCGIDTLDLGLYVSWDTRWNSTKAGLEDKKSAAQQTTELLDQTDIGRE
FLHHPSGKAPNYRYQLHFPEYRVYIAISDKPGKSPNVYVTIKAETLWHVEFPTILELLEFDLDSFGGTIERIQPSRVDLC
ADFRINPPPTLQFIQQHRVSRSTMIRPYLSGETLETFYSGSPSSPVQIRIYDKGKEILKTNKQWFLPIWGVDTPEGVWRV
EFQLRRTFLHQYRIKTIEDLWGKIGTIWEYLTAEWFSLRLPDNEKAERRTIHPWWLLVQECSERFGGMSEVRRTYTTDTV
EPIQKTLAHICGRLVSIAAQEGIKDRMKAILHLEELIYQRMDEEKFRSEYKKKAIKLGYRGELGGAEYEG

Sequences:

>Translated_390_residues
MSTLPPYQIPTSMAESVTRHAQNPPISESLFLSCGIDTLDLGLYVSWDTRWNSTKAGLEDKKSAAQQTTELLDQTDIGRE
FLHHPSGKAPNYRYQLHFPEYRVYIAISDKPGKSPNVYVTIKAETLWHVEFPTILELLEFDLDSFGGTIERIQPSRVDLC
ADFRINPPPTLQFIQQHRVSRSTMIRPYLSGETLETFYSGSPSSPVQIRIYDKGKEILKTNKQWFLPIWGVDTPEGVWRV
EFQLRRTFLHQYRIKTIEDLWGKIGTIWEYLTAEWFSLRLPDNEKAERRTIHPWWLLVQECSERFGGMSEVRRTYTTDTV
EPIQKTLAHICGRLVSIAAQEGIKDRMKAILHLEELIYQRMDEEKFRSEYKKKAIKLGYRGELGGAEYEG
>Mature_389_residues
STLPPYQIPTSMAESVTRHAQNPPISESLFLSCGIDTLDLGLYVSWDTRWNSTKAGLEDKKSAAQQTTELLDQTDIGREF
LHHPSGKAPNYRYQLHFPEYRVYIAISDKPGKSPNVYVTIKAETLWHVEFPTILELLEFDLDSFGGTIERIQPSRVDLCA
DFRINPPPTLQFIQQHRVSRSTMIRPYLSGETLETFYSGSPSSPVQIRIYDKGKEILKTNKQWFLPIWGVDTPEGVWRVE
FQLRRTFLHQYRIKTIEDLWGKIGTIWEYLTAEWFSLRLPDNEKAERRTIHPWWLLVQECSERFGGMSEVRRTYTTDTVE
PIQKTLAHICGRLVSIAAQEGIKDRMKAILHLEELIYQRMDEEKFRSEYKKKAIKLGYRGELGGAEYEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45285; Mature: 45154

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLPPYQIPTSMAESVTRHAQNPPISESLFLSCGIDTLDLGLYVSWDTRWNSTKAGLED
CCCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCCEEEEEEEEEECCCCCCCCCCCHH
KKSAAQQTTELLDQTDIGREFLHHPSGKAPNYRYQLHFPEYRVYIAISDKPGKSPNVYVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEE
IKAETLWHVEFPTILELLEFDLDSFGGTIERIQPSRVDLCADFRINPPPTLQFIQQHRVS
EEEEEEEEECHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHH
RSTMIRPYLSGETLETFYSGSPSSPVQIRIYDKGKEILKTNKQWFLPIWGVDTPEGVWRV
HHHEECCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCCEEEH
EFQLRRTFLHQYRIKTIEDLWGKIGTIWEYLTAEWFSLRLPDNEKAERRTIHPWWLLVQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCHHHHHHHH
CSERFGGMSEVRRTYTTDTVEPIQKTLAHICGRLVSIAAQEGIKDRMKAILHLEELIYQR
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDEEKFRSEYKKKAIKLGYRGELGGAEYEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
STLPPYQIPTSMAESVTRHAQNPPISESLFLSCGIDTLDLGLYVSWDTRWNSTKAGLED
CCCCCCCCCHHHHHHHHHHCCCCCCCHHHEEECCCCEEEEEEEEEECCCCCCCCCCCHH
KKSAAQQTTELLDQTDIGREFLHHPSGKAPNYRYQLHFPEYRVYIAISDKPGKSPNVYVT
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCCCCCCCEEEE
IKAETLWHVEFPTILELLEFDLDSFGGTIERIQPSRVDLCADFRINPPPTLQFIQQHRVS
EEEEEEEEECHHHHHHHHHHHHHHHCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHH
RSTMIRPYLSGETLETFYSGSPSSPVQIRIYDKGKEILKTNKQWFLPIWGVDTPEGVWRV
HHHEECCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHCCCCEEEEEECCCCCCCEEEH
EFQLRRTFLHQYRIKTIEDLWGKIGTIWEYLTAEWFSLRLPDNEKAERRTIHPWWLLVQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCHHHHHHHH
CSERFGGMSEVRRTYTTDTVEPIQKTLAHICGRLVSIAAQEGIKDRMKAILHLEELIYQR
HHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MDEEKFRSEYKKKAIKLGYRGELGGAEYEG
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA