| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119297
Identifier: 197119297
GI number: 197119297
Start: 3375926
End: 3376495
Strand: Direct
Name: 197119297
Synonym: Gbem_2925
Alternate gene names: NA
Gene position: 3375926-3376495 (Clockwise)
Preceding gene: 197119292
Following gene: 197119298
Centisome position: 73.15
GC content: 58.07
Gene sequence:
>570_bases ATGCGAGACTTCATTGCGGAGGCGGTGCGTTTTGCGGTGATCATCGAGAAAAAGAGCTACGACATCTATCGGCAGGCGGC TTTGGAGGGAGTGGACCTGGCGGGCAAACGGATCTTCGAAAAACTGGCGCGCGACGAATCCATGCACATAGACTCCCTTT TGTGGCAGCATCCTGGGACCTGGTGCAGCGATCTCAAGCAAAAACAAGAGCCCCAGCCGGTGGTCGAATGGGACCTGAGC GGGCCGTCGGGAAACAGGCTGTTCGACCAGTTGCGCCTTGCCCTCCTTAATAAGCGCTGGAGCATCGGTTTTTACACCAC CCTCCTCAAGACCTTCAAAGAACCCCTAATCTGCCGCGTTTTCGAGGTGACTCTCGCGGTGGCACGCAATGAATTCAAGC TGATCACGGACGAGTACCTGCAGGCCGACGCTTCCTATGGCAAACCCCGCGATAATCGTCCTCCGCGCAGGGTCCACGTG AGGGAAGGCATCCTCGCCTCCCCCCCTAACAAGCACTCGGAGCTGTACTTCTCCATGCTCGACGCAGGCCGCTCTTCCCG CCAGGAATAG
Upstream 100 bases:
>100_bases CCCATTACCAGTGAAGCTACCATTGCGAATGTTAAAAAGTCGTAACCAAAACAGGTGCATGCGGCTGACCTTGAGGGGTA CGACTTTAAAGGAACGTAAG
Downstream 100 bases:
>100_bases CAGCACTGGCGCCACTTTCCTCCCCTTCCCGGCTATAAGGTTTCTTCCTCGCACCACGTCAAACCTGCTAAAGTAAGACC TCATATGAAATCCATCCCCG
Product: ferritin-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MRDFIAEAVRFAVIIEKKSYDIYRQAALEGVDLAGKRIFEKLARDESMHIDSLLWQHPGTWCSDLKQKQEPQPVVEWDLS GPSGNRLFDQLRLALLNKRWSIGFYTTLLKTFKEPLICRVFEVTLAVARNEFKLITDEYLQADASYGKPRDNRPPRRVHV REGILASPPNKHSELYFSMLDAGRSSRQE
Sequences:
>Translated_189_residues MRDFIAEAVRFAVIIEKKSYDIYRQAALEGVDLAGKRIFEKLARDESMHIDSLLWQHPGTWCSDLKQKQEPQPVVEWDLS GPSGNRLFDQLRLALLNKRWSIGFYTTLLKTFKEPLICRVFEVTLAVARNEFKLITDEYLQADASYGKPRDNRPPRRVHV REGILASPPNKHSELYFSMLDAGRSSRQE >Mature_189_residues MRDFIAEAVRFAVIIEKKSYDIYRQAALEGVDLAGKRIFEKLARDESMHIDSLLWQHPGTWCSDLKQKQEPQPVVEWDLS GPSGNRLFDQLRLALLNKRWSIGFYTTLLKTFKEPLICRVFEVTLAVARNEFKLITDEYLQADASYGKPRDNRPPRRVHV REGILASPPNKHSELYFSMLDAGRSSRQE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21910; Mature: 21910
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDFIAEAVRFAVIIEKKSYDIYRQAALEGVDLAGKRIFEKLARDESMHIDSLLWQHPGT CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC WCSDLKQKQEPQPVVEWDLSGPSGNRLFDQLRLALLNKRWSIGFYTTLLKTFKEPLICRV HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FEVTLAVARNEFKLITDEYLQADASYGKPRDNRPPRRVHVREGILASPPNKHSELYFSML HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH DAGRSSRQE HCCCCCCCC >Mature Secondary Structure MRDFIAEAVRFAVIIEKKSYDIYRQAALEGVDLAGKRIFEKLARDESMHIDSLLWQHPGT CHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCC WCSDLKQKQEPQPVVEWDLSGPSGNRLFDQLRLALLNKRWSIGFYTTLLKTFKEPLICRV HHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH FEVTLAVARNEFKLITDEYLQADASYGKPRDNRPPRRVHVREGILASPPNKHSELYFSML HHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHCCCCCCCCCCHHHHHHHHH DAGRSSRQE HCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA