| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119286
Identifier: 197119286
GI number: 197119286
Start: 3362286
End: 3362765
Strand: Direct
Name: 197119286
Synonym: Gbem_2914
Alternate gene names: NA
Gene position: 3362286-3362765 (Clockwise)
Preceding gene: 197119283
Following gene: 197119292
Centisome position: 72.85
GC content: 56.67
Gene sequence:
>480_bases ATGAACGTTTTTGACTTTGCTATGAAGATCGAGCTGCAAGGGAAGGCGTATTACGAAACACTGGCCGAGTCGGCCCGGAT TCCGGAGCTGAAAGGAATCTTCACCGGTCTGGCAGCCGACGAACAAAAGCATTACGACCTGTTCAAAAGCCTAAAGGAGG GTAAGAACTGGGGAATGGCGGATTCGACCATGCTCATGCAGGCAAGGAGCGTCTTCACCGACCTGATCGAAAGGCCGGAG GCCCCGCGGGAGACGCAGGACGCGCTGGGCGCGTACCAGCTAGCGCTGAAGATGGAGGCTGAGAGCGTCATGCTCTACGA ACAAATGGCCAAGAAAGAGGAAGATCCGGTGCTGGTGCGGCTTTACCTCACCCTTGCCAACGAAGAAAGAAGCCACTACA ACATTCTGGACAACCTCTGCCAGCTCGCGAAGAGGCCCAAGGAGTGCGTGCAGTGGCGGGAGTCCGAGGGGAAGGAGTGA
Upstream 100 bases:
>100_bases ACTACCATGAGAATCCTCACATAGCAACCCTTTGCTCCCCATACTCAGTAGAGAACGACTGCCACAGAACATCCACCGGT TAAGTGAATGGAGGAACGCC
Downstream 100 bases:
>100_bases TCCTTATTGCGATCAATGGAGGTCAGGCGTTCACAGCCCTTCTCTCGATCCCGGTATAGGGCTCGCTTCTTTTCTCTACC TCGCCCCTCATCTCTGCCTC
Product: ferritin-like domain-containing protein
Products: NA
Alternate protein names: Ferritin-Like Domain-Containing Protein; Rubrerythrin Subfamily Protein
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MNVFDFAMKIELQGKAYYETLAESARIPELKGIFTGLAADEQKHYDLFKSLKEGKNWGMADSTMLMQARSVFTDLIERPE APRETQDALGAYQLALKMEAESVMLYEQMAKKEEDPVLVRLYLTLANEERSHYNILDNLCQLAKRPKECVQWRESEGKE
Sequences:
>Translated_159_residues MNVFDFAMKIELQGKAYYETLAESARIPELKGIFTGLAADEQKHYDLFKSLKEGKNWGMADSTMLMQARSVFTDLIERPE APRETQDALGAYQLALKMEAESVMLYEQMAKKEEDPVLVRLYLTLANEERSHYNILDNLCQLAKRPKECVQWRESEGKE >Mature_159_residues MNVFDFAMKIELQGKAYYETLAESARIPELKGIFTGLAADEQKHYDLFKSLKEGKNWGMADSTMLMQARSVFTDLIERPE APRETQDALGAYQLALKMEAESVMLYEQMAKKEEDPVLVRLYLTLANEERSHYNILDNLCQLAKRPKECVQWRESEGKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18362; Mature: 18362
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFDFAMKIELQGKAYYETLAESARIPELKGIFTGLAADEQKHYDLFKSLKEGKNWGMA CCHHHEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC DSTMLMQARSVFTDLIERPEAPRETQDALGAYQLALKMEAESVMLYEQMAKKEEDPVLVR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LYLTLANEERSHYNILDNLCQLAKRPKECVQWRESEGKE EEEEHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCC >Mature Secondary Structure MNVFDFAMKIELQGKAYYETLAESARIPELKGIFTGLAADEQKHYDLFKSLKEGKNWGMA CCHHHEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC DSTMLMQARSVFTDLIERPEAPRETQDALGAYQLALKMEAESVMLYEQMAKKEEDPVLVR HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE LYLTLANEERSHYNILDNLCQLAKRPKECVQWRESEGKE EEEEHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA