| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197119185
Identifier: 197119185
GI number: 197119185
Start: 3240496
End: 3240822
Strand: Direct
Name: 197119185
Synonym: Gbem_2812
Alternate gene names: NA
Gene position: 3240496-3240822 (Clockwise)
Preceding gene: 197119184
Following gene: 197119186
Centisome position: 70.21
GC content: 61.47
Gene sequence:
>327_bases GTGGGGGTAGGTGCCACTACCAATACGGCGCGCCAGCGCATTCACAATCAAAAGGAGATCGACCCGCAGATGAAAATCAG CTACAAGACTTCCGGGAGCTGCGCCTCCCGCATCGAGATCGAGATCGACAACGGCCTTATCGTAGACACGACGTTCGTCG ACGGCTGCGCCGGCAACACCAAGGCGGTAGCCGCACTGGTGCGCGGCATGGAGGTAAGCGAGGCGGTCAGGAGGCTCAAA GGTATCGCCTGCCAGGGTGACACCTCCTGTCCGGACCAGTTGGCCCAAGCGCTGGAAAAGGCGCAGTCCGACGCCCTCGC ATCTTAG
Upstream 100 bases:
>100_bases TTCAGCAGCGCCCCCTCACCCCGACCCTCTCCCAAAGGGAGAGGGAGGATGGACGGCTGCCGAAAGAGTCCCCCCTCCAC TGGCGGGAGGGGGTTAGGGG
Downstream 100 bases:
>100_bases AAAGGGGAGTTATGGAAATCTTCGGCGGCTTCATGATGATGATGTCCATTCTGGGATTTTTCCTGGTGGTGATCTGGTTC CTGGTCCCCTTCCTGATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MGVGATTNTARQRIHNQKEIDPQMKISYKTSGSCASRIEIEIDNGLIVDTTFVDGCAGNTKAVAALVRGMEVSEAVRRLK GIACQGDTSCPDQLAQALEKAQSDALAS
Sequences:
>Translated_108_residues MGVGATTNTARQRIHNQKEIDPQMKISYKTSGSCASRIEIEIDNGLIVDTTFVDGCAGNTKAVAALVRGMEVSEAVRRLK GIACQGDTSCPDQLAQALEKAQSDALAS >Mature_107_residues GVGATTNTARQRIHNQKEIDPQMKISYKTSGSCASRIEIEIDNGLIVDTTFVDGCAGNTKAVAALVRGMEVSEAVRRLKG IACQGDTSCPDQLAQALEKAQSDALAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11398; Mature: 11267
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVGATTNTARQRIHNQKEIDPQMKISYKTSGSCASRIEIEIDNGLIVDTTFVDGCAGNT CCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCH KAVAALVRGMEVSEAVRRLKGIACQGDTSCPDQLAQALEKAQSDALAS HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GVGATTNTARQRIHNQKEIDPQMKISYKTSGSCASRIEIEIDNGLIVDTTFVDGCAGNT CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEEEEECCCEEEEECCCCCCCCCH KAVAALVRGMEVSEAVRRLKGIACQGDTSCPDQLAQALEKAQSDALAS HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA