| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119184
Identifier: 197119184
GI number: 197119184
Start: 3239855
End: 3240364
Strand: Direct
Name: 197119184
Synonym: Gbem_2811
Alternate gene names: NA
Gene position: 3239855-3240364 (Clockwise)
Preceding gene: 197119183
Following gene: 197119185
Centisome position: 70.2
GC content: 64.9
Gene sequence:
>510_bases ATGGCGGGACTGGAAAATTATCACGCACTTGTGGAGCGTATCGACGATCTCTGCGCCCGGACCGTAGACCAATTCCCCGA AAATATCGCCTGCCGCGCCGGATGCGACGCCTGCTGCCGGCACCTCTCCATCTTCGCCGTAGAGGCAGCCGCCGTGAGGG AGGCGCTGAAAAGCCGCTCCGCGGACGAAGCCGACCTCATCCGCGGCCTCGCCGCAAGCGCAGAGCCGGTGCGCTGCCCT TTGCTCCACGACGGGCTCTGCCTGCTCTACGAGGCGCGCCCGGTCATCTGCCGCACCCACGGACTGCCGCTGATGCTTGA GTGCGACGGCGAAAAAAGCATCGACTTTTGTCCCGAGAACTTCAAGGGGCTTCCGAGCATCCCCGGCAGCGCCGTCATCG ACCTCGAGCGCCTCAACACCATGCTGACCGCCATCAACGCACTCTACCTGCAGGAGTTTCCGGGTCCGGAGCGGCTCACC ATGGCCCAGGCACTCGCCCTCGCCGATTGA
Upstream 100 bases:
>100_bases AAGACCTTCGGCTTTGCCGGCACCATCGAAAAACCCTACTTTTACCTCAACAAGCAGCTGATGGAAGATTTCAGCAAAAG CCTGCGCGAGAACGGTTAGC
Downstream 100 bases:
>100_bases CTTTTTTCCCGCTTCGCGATATACCGCCCACTTCAGCAGCGCCCCCTCACCCCGACCCTCTCCCAAAGGGAGAGGGAGGA TGGACGGCTGCCGAAAGAGT
Product: iron-sulfur cluster-binding oxidoreductase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MAGLENYHALVERIDDLCARTVDQFPENIACRAGCDACCRHLSIFAVEAAAVREALKSRSADEADLIRGLAASAEPVRCP LLHDGLCLLYEARPVICRTHGLPLMLECDGEKSIDFCPENFKGLPSIPGSAVIDLERLNTMLTAINALYLQEFPGPERLT MAQALALAD
Sequences:
>Translated_169_residues MAGLENYHALVERIDDLCARTVDQFPENIACRAGCDACCRHLSIFAVEAAAVREALKSRSADEADLIRGLAASAEPVRCP LLHDGLCLLYEARPVICRTHGLPLMLECDGEKSIDFCPENFKGLPSIPGSAVIDLERLNTMLTAINALYLQEFPGPERLT MAQALALAD >Mature_168_residues AGLENYHALVERIDDLCARTVDQFPENIACRAGCDACCRHLSIFAVEAAAVREALKSRSADEADLIRGLAASAEPVRCPL LHDGLCLLYEARPVICRTHGLPLMLECDGEKSIDFCPENFKGLPSIPGSAVIDLERLNTMLTAINALYLQEFPGPERLTM AQALALAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18369; Mature: 18238
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 6.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGLENYHALVERIDDLCARTVDQFPENIACRAGCDACCRHLSIFAVEAAAVREALKSRS CCCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC ADEADLIRGLAASAEPVRCPLLHDGLCLLYEARPVICRTHGLPLMLECDGEKSIDFCPEN CCHHHHHHHHHCCCCCCCCCCHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC FKGLPSIPGSAVIDLERLNTMLTAINALYLQEFPGPERLTMAQALALAD CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC >Mature Secondary Structure AGLENYHALVERIDDLCARTVDQFPENIACRAGCDACCRHLSIFAVEAAAVREALKSRS CCHHHHHHHHHHHHHHHHHHHHHCCHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC ADEADLIRGLAASAEPVRCPLLHDGLCLLYEARPVICRTHGLPLMLECDGEKSIDFCPEN CCHHHHHHHHHCCCCCCCCCCHHCCEEEEEECCCEEEEECCCEEEEEECCCCCCCCCCCC FKGLPSIPGSAVIDLERLNTMLTAINALYLQEFPGPERLTMAQALALAD CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA