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The map label for this gene is dprA [H]

Identifier: 197119085

GI number: 197119085

Start: 3129740

End: 3130819

Strand: Reverse

Name: dprA [H]

Synonym: Gbem_2712

Alternate gene names: 197119085

Gene position: 3130819-3129740 (Counterclockwise)

Preceding gene: 197119086

Following gene: 197119084

Centisome position: 67.84

GC content: 65.74

Gene sequence:

>1080_bases
ATGGATCACTACTACTGGTTCGCGCTCAAGTCGGCGCCGCTAGTGGGAAACGTCACCTTCCTGCGGCTTTTGTCCCGCTT
CGGGACGCCGGAGCGCGTGCTCGAGGCTTCCCCGCAGGAGCTCTCGGAGGTCAGGGGAGTGAGCCCGCAGGCCGCGACCT
CCATCGCCGGACACGACTACGCTCACCAGGCGTCTAGCGAATGCGAGAAGGTGCGGGCCTTGGGCGTCGACGTCATCGAC
ATCCTGTCCGATCGCTACCCTCGCCTTTTGATGGAGATCCCGGACCCGCCCCCGTATTTTTATCTCAAAGGGGCGCTTTC
CGGCAGCGAAACCGCAGTCGCCATGGTCGGTTCCAGGCGGGCTTCGCAGTACGGCCTCTGCACCGCGACGAGACTTGCGC
GCGACCTGGCGCTGCAGGGAGTCACCGTCGTCTCAGGGATGGCGCGCGGCATAGACACGGCGGCGCACTGGGGAGCGCTC
AAGGCAGGCGGCCGCAGCGTCGCCGTACTTGGTTGCGGCATCGACCTGGTCTACCCGCCGGAGAACGGGGCGCTCTACCA
GGCTCTTGCCGAGAGCGGGGCGCTCATCAGCGAATTCCCCATGGGGACCCCGCCCCAGGCTGAGAACTTCCCCCGCCGCA
ACAGGATCATCAGCGCGCTGTCGCGCGGCGTGCTGGTAGTGGAGGCGGGGGAGGCGAGCGGTTCGCTGATCACGGCGCAT
TACGCGCTGGAGCAGGGGCGCGAGGTCTTCGCCGTTCCCGGCAACGTCTCGGTGAGCGGCAGCAGGGGCGTTAACGGCCT
GATCAAGGAAGGGGCCAAGCTCGTGGAGCGGGTGGAGGATATCCTGGAGGAGCTCGGCCTGGAGCCGCAGGCCAACCTTC
CCCTCCCGAAGCCCTCGAGCTTCGAGCTCAACCCGCAGGAGGCGGAGCTTTACGCCCTCATTTGCCAGGGGGCGCTGCAG
ATCGACGACATCATCGTGCAGAGCGCGTTGACAGCAAGCGAGGTTTCCGCTACTTTACTTCGCTTGGAAATGAAGGGAGC
CATAGTCCAACTCCCGGGCAAGCGCTTCGCAGTTGCGTGA

Upstream 100 bases:

>100_bases
CAGTTCCACAGCCGTCATCGTCAAGAGCGTCGACACCGTGTACCGTGGCGACAGGGTGGAGATGCGAAAAAACAGGTAGC
TGGCCAAAGGGGGTAACCCC

Downstream 100 bases:

>100_bases
GGCGTTGCCCCCAAAGGCGTAAAATCCATACTAGGTGGACACATGTCTCAGAATCTCGTCATCGTTGAGTCTCCCGCCAA
GGCGAAGACCATTGAAAAAT

Product: DNA uptake/processing protein SMF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MDHYYWFALKSAPLVGNVTFLRLLSRFGTPERVLEASPQELSEVRGVSPQAATSIAGHDYAHQASSECEKVRALGVDVID
ILSDRYPRLLMEIPDPPPYFYLKGALSGSETAVAMVGSRRASQYGLCTATRLARDLALQGVTVVSGMARGIDTAAHWGAL
KAGGRSVAVLGCGIDLVYPPENGALYQALAESGALISEFPMGTPPQAENFPRRNRIISALSRGVLVVEAGEASGSLITAH
YALEQGREVFAVPGNVSVSGSRGVNGLIKEGAKLVERVEDILEELGLEPQANLPLPKPSSFELNPQEAELYALICQGALQ
IDDIIVQSALTASEVSATLLRLEMKGAIVQLPGKRFAVA

Sequences:

>Translated_359_residues
MDHYYWFALKSAPLVGNVTFLRLLSRFGTPERVLEASPQELSEVRGVSPQAATSIAGHDYAHQASSECEKVRALGVDVID
ILSDRYPRLLMEIPDPPPYFYLKGALSGSETAVAMVGSRRASQYGLCTATRLARDLALQGVTVVSGMARGIDTAAHWGAL
KAGGRSVAVLGCGIDLVYPPENGALYQALAESGALISEFPMGTPPQAENFPRRNRIISALSRGVLVVEAGEASGSLITAH
YALEQGREVFAVPGNVSVSGSRGVNGLIKEGAKLVERVEDILEELGLEPQANLPLPKPSSFELNPQEAELYALICQGALQ
IDDIIVQSALTASEVSATLLRLEMKGAIVQLPGKRFAVA
>Mature_359_residues
MDHYYWFALKSAPLVGNVTFLRLLSRFGTPERVLEASPQELSEVRGVSPQAATSIAGHDYAHQASSECEKVRALGVDVID
ILSDRYPRLLMEIPDPPPYFYLKGALSGSETAVAMVGSRRASQYGLCTATRLARDLALQGVTVVSGMARGIDTAAHWGAL
KAGGRSVAVLGCGIDLVYPPENGALYQALAESGALISEFPMGTPPQAENFPRRNRIISALSRGVLVVEAGEASGSLITAH
YALEQGREVFAVPGNVSVSGSRGVNGLIKEGAKLVERVEDILEELGLEPQANLPLPKPSSFELNPQEAELYALICQGALQ
IDDIIVQSALTASEVSATLLRLEMKGAIVQLPGKRFAVA

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=278, Percent_Identity=43.8848920863309, Blast_Score=192, Evalue=3e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38208; Mature: 38208

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDHYYWFALKSAPLVGNVTFLRLLSRFGTPERVLEASPQELSEVRGVSPQAATSIAGHDY
CCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCH
AHQASSECEKVRALGVDVIDILSDRYPRLLMEIPDPPPYFYLKGALSGSETAVAMVGSRR
HHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC
ASQYGLCTATRLARDLALQGVTVVSGMARGIDTAAHWGALKAGGRSVAVLGCGIDLVYPP
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHCCCCEEEEEEECEEEEECC
ENGALYQALAESGALISEFPMGTPPQAENFPRRNRIISALSRGVLVVEAGEASGSLITAH
CCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEE
YALEQGREVFAVPGNVSVSGSRGVNGLIKEGAKLVERVEDILEELGLEPQANLPLPKPSS
HHHHCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FELNPQEAELYALICQGALQIDDIIVQSALTASEVSATLLRLEMKGAIVQLPGKRFAVA
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure
MDHYYWFALKSAPLVGNVTFLRLLSRFGTPERVLEASPQELSEVRGVSPQAATSIAGHDY
CCCEEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHCCHHHHHHHCCCCCHHHHHHCCCCH
AHQASSECEKVRALGVDVIDILSDRYPRLLMEIPDPPPYFYLKGALSGSETAVAMVGSRR
HHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCCCEEEEEECCCC
ASQYGLCTATRLARDLALQGVTVVSGMARGIDTAAHWGALKAGGRSVAVLGCGIDLVYPP
CCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHCHHHCCCCEEEEEEECEEEEECC
ENGALYQALAESGALISEFPMGTPPQAENFPRRNRIISALSRGVLVVEAGEASGSLITAH
CCCHHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHHHHCCEEEEECCCCCCCEEEEE
YALEQGREVFAVPGNVSVSGSRGVNGLIKEGAKLVERVEDILEELGLEPQANLPLPKPSS
HHHHCCCEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
FELNPQEAELYALICQGALQIDDIIVQSALTASEVSATLLRLEMKGAIVQLPGKRFAVA
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]