| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is maf [C]
Identifier: 197119081
GI number: 197119081
Start: 3124967
End: 3125548
Strand: Reverse
Name: maf [C]
Synonym: Gbem_2708
Alternate gene names: 197119081
Gene position: 3125548-3124967 (Counterclockwise)
Preceding gene: 197119082
Following gene: 197119080
Centisome position: 67.72
GC content: 63.57
Gene sequence:
>582_bases ATGAAAAACAGCAGCATCGTACTCGCCTCGGCGTCGCCCAGGCGGAGCGAGCTTTTGGAGTCGGCGGGGATCCAGTTCCG GGTGGTCCCGGCGGACATAAACGAAGAGCCCTTCCCCGGGGAGGAACCGGTCGATCACGTGCAAAGGCTCGCTGAAGGAA AGGCCCGCGCCGCGGCGGAACTTGCCGAAGGGAGGTTCTTCCTCGGCGCCGACACCATCGTTCTTTGCGACGGCGAGATC ATGGGGAAACCCAAGGACGCCGCCGATGCTAAGCGCATGCTGAACAAGCTCTCCGGCGTGCCGCACGAGGTGGTCACCGG TTTCGCCATCTACGACCGGGAGCGCAAGGGGGCTGTGGTCGAGGCCATCAGGACCAAGGTGTTTTTCAAAAAGCTGCGCG ACGAGGAGATCCTGGACTACATTGCCACCGGCTGCCCCTTCGACAAGGCCGGCGCCTACGCCATCCAGGGGGGTGCTGCG CACATGGTGCAGAAGATAGAGGGCTCTTACACCAACGTGGTCGGCCTGCCGCTTTGCGAGGTGGTGGACGCGCTGAGGGT GATAGGGGCCCTGGGGAACTAG
Upstream 100 bases:
>100_bases AATATCGCCTTGGGGATGGTCATCCTGGTGGCCACCTCGCTCTTCGTCCTGATGTGCCGCAAATGCCGCGGCAGGGACAA GGCGAAATAAGGAGAAAAGA
Downstream 100 bases:
>100_bases GGAGGGTGCATGTCGGTAGCTGAGAACCTGGGGAAAATCAGGGAGCGAATCAGGCAGGCGGCGCTCAGGGCCGGGAGGGA ACCGGATGCGGTCCGGCTGG
Product: Maf-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKNSSIVLASASPRRSELLESAGIQFRVVPADINEEPFPGEEPVDHVQRLAEGKARAAAELAEGRFFLGADTIVLCDGEI MGKPKDAADAKRMLNKLSGVPHEVVTGFAIYDRERKGAVVEAIRTKVFFKKLRDEEILDYIATGCPFDKAGAYAIQGGAA HMVQKIEGSYTNVVGLPLCEVVDALRVIGALGN
Sequences:
>Translated_193_residues MKNSSIVLASASPRRSELLESAGIQFRVVPADINEEPFPGEEPVDHVQRLAEGKARAAAELAEGRFFLGADTIVLCDGEI MGKPKDAADAKRMLNKLSGVPHEVVTGFAIYDRERKGAVVEAIRTKVFFKKLRDEEILDYIATGCPFDKAGAYAIQGGAA HMVQKIEGSYTNVVGLPLCEVVDALRVIGALGN >Mature_193_residues MKNSSIVLASASPRRSELLESAGIQFRVVPADINEEPFPGEEPVDHVQRLAEGKARAAAELAEGRFFLGADTIVLCDGEI MGKPKDAADAKRMLNKLSGVPHEVVTGFAIYDRERKGAVVEAIRTKVFFKKLRDEEILDYIATGCPFDKAGAYAIQGGAA HMVQKIEGSYTNVVGLPLCEVVDALRVIGALGN
Specific function: Unknown
COG id: COG0424
COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the maf family [H]
Homologues:
Organism=Homo sapiens, GI117553627, Length=190, Percent_Identity=40, Blast_Score=117, Evalue=5e-27, Organism=Homo sapiens, GI291045183, Length=184, Percent_Identity=38.5869565217391, Blast_Score=105, Evalue=3e-23, Organism=Homo sapiens, GI310133124, Length=117, Percent_Identity=44.4444444444444, Blast_Score=91, Evalue=5e-19, Organism=Homo sapiens, GI291045181, Length=117, Percent_Identity=44.4444444444444, Blast_Score=91, Evalue=7e-19, Organism=Escherichia coli, GI1789646, Length=190, Percent_Identity=45.7894736842105, Blast_Score=147, Evalue=5e-37, Organism=Escherichia coli, GI87081830, Length=182, Percent_Identity=32.967032967033, Blast_Score=97, Evalue=5e-22, Organism=Caenorhabditis elegans, GI193202443, Length=193, Percent_Identity=37.8238341968912, Blast_Score=106, Evalue=6e-24, Organism=Saccharomyces cerevisiae, GI6324685, Length=205, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=6e-13, Organism=Drosophila melanogaster, GI78706856, Length=196, Percent_Identity=37.7551020408163, Blast_Score=114, Evalue=4e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003697 [H]
Pfam domain/function: PF02545 Maf [H]
EC number: NA
Molecular weight: Translated: 20770; Mature: 20770
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSSIVLASASPRRSELLESAGIQFRVVPADINEEPFPGEEPVDHVQRLAEGKARAAAE CCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH LAEGRFFLGADTIVLCDGEIMGKPKDAADAKRMLNKLSGVPHEVVTGFAIYDRERKGAVV HHCCCEEECCCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH EAIRTKVFFKKLRDEEILDYIATGCPFDKAGAYAIQGGAAHMVQKIEGSYTNVVGLPLCE HHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHH VVDALRVIGALGN HHHHHHHHHHCCC >Mature Secondary Structure MKNSSIVLASASPRRSELLESAGIQFRVVPADINEEPFPGEEPVDHVQRLAEGKARAAAE CCCCCEEEEECCCHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH LAEGRFFLGADTIVLCDGEIMGKPKDAADAKRMLNKLSGVPHEVVTGFAIYDRERKGAVV HHCCCEEECCCEEEEECCHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHH EAIRTKVFFKKLRDEEILDYIATGCPFDKAGAYAIQGGAAHMVQKIEGSYTNVVGLPLCE HHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCCCCHHH VVDALRVIGALGN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA