Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119052

Identifier: 197119052

GI number: 197119052

Start: 3099206

End: 3099934

Strand: Direct

Name: 197119052

Synonym: Gbem_2675

Alternate gene names: NA

Gene position: 3099206-3099934 (Clockwise)

Preceding gene: 197119051

Following gene: 308535311

Centisome position: 67.15

GC content: 55.83

Gene sequence:

>729_bases
ATGAACCGTAACAAGACCCGATTTCTGTTAATGACACTGGTAGCAGTCGTGACGCTCGGAATGGACAGCTTACCGGCCCT
TGCCAAGGACTCACGCATTATCGAGTTTAGCCGGGACACACCAGGAGCAGAGGCCAAGGCCTTCAGCTCCCTGATCGGTG
TTTGGCACGTGGACCGGGACGGTGCCCGGACTGTGTACGCGGTGGACGGCAAGAACTGGGTACAGGGGGTCATGGCCCCA
GCGGTGGGTGAAAAAGCAAAGTCGCTTTACGGGCACGGCGCTTCGGAGTTCCTGCGCAACCTGGAGAAATACCGCTACTT
CCCGCTTACGGTTTTAAAGGAGGTCAAGGATTTCAAGGAGGGGATTATCGAGGTTACGTTCAAACCGGTGAGCGGCAGGA
TCGACCAAGCTGCTGGCATCGCTTTCAACATCAAGCCCAACGGGGATTACCTGGTCATCCGGGCCAACGCCCAAGAAGAG
AACCTGGTCTTCTTCAAGCTGGACCAGGGTAGGCGCTCGACGGTGCAGTGGATTAACAAGGTGCCGGTTCCCTCGAACCG
CTGGCAGACTCTGAAGGTGGTTGTCAACGGCAGGAAGATCGAGGGGTATCTGAACGGCACGAAATATGTGGATTACCTTT
GGAGCGAGGACATCGACGGCAGAATAGGTCTCTGGTCCAAGGCCGACTCCTATGTCTTTTTCGACAAGGTGTCGGTGACA
ACCAAGTAA

Upstream 100 bases:

>100_bases
CACCATCAAAGTAAAAAAAGGATGATCAAGCTACGGGGCCTGGGCGAACCAGGCCCCGTTCATTTTCAAGGCAACAGCCG
GCACTCTCCAGGAGTAGCGT

Downstream 100 bases:

>100_bases
GGCCGCCTCACGGGAACTCTTTTTGTGCGGCACACACCCTACCCCATAGCAACGACACCTCTTCGGCAAATCCCGCTTTG
TAGATACGGCGAATACATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MNRNKTRFLLMTLVAVVTLGMDSLPALAKDSRIIEFSRDTPGAEAKAFSSLIGVWHVDRDGARTVYAVDGKNWVQGVMAP
AVGEKAKSLYGHGASEFLRNLEKYRYFPLTVLKEVKDFKEGIIEVTFKPVSGRIDQAAGIAFNIKPNGDYLVIRANAQEE
NLVFFKLDQGRRSTVQWINKVPVPSNRWQTLKVVVNGRKIEGYLNGTKYVDYLWSEDIDGRIGLWSKADSYVFFDKVSVT
TK

Sequences:

>Translated_242_residues
MNRNKTRFLLMTLVAVVTLGMDSLPALAKDSRIIEFSRDTPGAEAKAFSSLIGVWHVDRDGARTVYAVDGKNWVQGVMAP
AVGEKAKSLYGHGASEFLRNLEKYRYFPLTVLKEVKDFKEGIIEVTFKPVSGRIDQAAGIAFNIKPNGDYLVIRANAQEE
NLVFFKLDQGRRSTVQWINKVPVPSNRWQTLKVVVNGRKIEGYLNGTKYVDYLWSEDIDGRIGLWSKADSYVFFDKVSVT
TK
>Mature_242_residues
MNRNKTRFLLMTLVAVVTLGMDSLPALAKDSRIIEFSRDTPGAEAKAFSSLIGVWHVDRDGARTVYAVDGKNWVQGVMAP
AVGEKAKSLYGHGASEFLRNLEKYRYFPLTVLKEVKDFKEGIIEVTFKPVSGRIDQAAGIAFNIKPNGDYLVIRANAQEE
NLVFFKLDQGRRSTVQWINKVPVPSNRWQTLKVVVNGRKIEGYLNGTKYVDYLWSEDIDGRIGLWSKADSYVFFDKVSVT
TK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27261; Mature: 27261

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRNKTRFLLMTLVAVVTLGMDSLPALAKDSRIIEFSRDTPGAEAKAFSSLIGVWHVDRD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCC
GARTVYAVDGKNWVQGVMAPAVGEKAKSLYGHGASEFLRNLEKYRYFPLTVLKEVKDFKE
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
GIIEVTFKPVSGRIDQAAGIAFNIKPNGDYLVIRANAQEENLVFFKLDQGRRSTVQWINK
CEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHC
VPVPSNRWQTLKVVVNGRKIEGYLNGTKYVDYLWSEDIDGRIGLWSKADSYVFFDKVSVT
CCCCCCCCEEEEEEEECEEEEEEECCCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEEE
TK
CC
>Mature Secondary Structure
MNRNKTRFLLMTLVAVVTLGMDSLPALAKDSRIIEFSRDTPGAEAKAFSSLIGVWHVDRD
CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHEEEECCC
GARTVYAVDGKNWVQGVMAPAVGEKAKSLYGHGASEFLRNLEKYRYFPLTVLKEVKDFKE
CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHC
GIIEVTFKPVSGRIDQAAGIAFNIKPNGDYLVIRANAQEENLVFFKLDQGRRSTVQWINK
CEEEEEEECCCCCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEECCCCHHHHHHHHC
VPVPSNRWQTLKVVVNGRKIEGYLNGTKYVDYLWSEDIDGRIGLWSKADSYVFFDKVSVT
CCCCCCCCEEEEEEEECEEEEEEECCCEEEEEEECCCCCCCEEECCCCCCEEEEEEEEEE
TK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA