| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is hinT [C]
Identifier: 197119030
GI number: 197119030
Start: 3071340
End: 3071684
Strand: Reverse
Name: hinT [C]
Synonym: Gbem_2653
Alternate gene names: 197119030
Gene position: 3071684-3071340 (Counterclockwise)
Preceding gene: 197119031
Following gene: 197119029
Centisome position: 66.56
GC content: 62.9
Gene sequence:
>345_bases ATGAACGACTGCCTGTTCTGCAAGATGGCCAGCGGCGCGATCCCCGTCAAGAAGGTCTACGAGGACGACGAACTCTTCGC CATCGAGGACATCAACCCCGTGGCGCCCTTGCACATGCTTATCATCCCCAAGAAGCACCTCGCGAACGCGCTGGCGCTTG CTCCTGAGGACGACCGGATCATCGGTGCGATCCACCGGGTGGCTGCCAAGCTCGCCCGGGAGCGCGGCATGGACGAGGAA GGGTTCCGCCTGGTGAACAATACCAACGCCGGCGCCGGCCAGTCCGTTTTCCATATCCATTTCCACCTGCTTGCCGGACG CAACCTCGGGTGGCCTCCAGGGTAG
Upstream 100 bases:
>100_bases AAACGCGGAAATGTTTGAAACCAACCCGGAGCTCTCTTCCTCTCTCAGATTCTCTCTCTGGCTAAAGGTTTTGGAGTTTG ACTTTTAAAGGAGGTGTTAC
Downstream 100 bases:
>100_bases TCCCTAACCGTAATCCATACAGGATCTGCACAAGGAGACTGACATGAAGAAGCTGCTTTTGCTTTTGCTCTTGCTATACC CGCTGTCCGCTTTGGCTGAG
Product: purine nucleoside phosphoramidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MNDCLFCKMASGAIPVKKVYEDDELFAIEDINPVAPLHMLIIPKKHLANALALAPEDDRIIGAIHRVAAKLARERGMDEE GFRLVNNTNAGAGQSVFHIHFHLLAGRNLGWPPG
Sequences:
>Translated_114_residues MNDCLFCKMASGAIPVKKVYEDDELFAIEDINPVAPLHMLIIPKKHLANALALAPEDDRIIGAIHRVAAKLARERGMDEE GFRLVNNTNAGAGQSVFHIHFHLLAGRNLGWPPG >Mature_114_residues MNDCLFCKMASGAIPVKKVYEDDELFAIEDINPVAPLHMLIIPKKHLANALALAPEDDRIIGAIHRVAAKLARERGMDEE GFRLVNNTNAGAGQSVFHIHFHLLAGRNLGWPPG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI4885413, Length=113, Percent_Identity=40.7079646017699, Blast_Score=103, Evalue=4e-23, Organism=Homo sapiens, GI14211923, Length=111, Percent_Identity=36.9369369369369, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787346, Length=109, Percent_Identity=43.1192660550459, Blast_Score=87, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=43.3628318584071, Blast_Score=103, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6320078, Length=115, Percent_Identity=34.7826086956522, Blast_Score=64, Evalue=5e-12, Organism=Drosophila melanogaster, GI28574010, Length=114, Percent_Identity=41.2280701754386, Blast_Score=93, Evalue=4e-20, Organism=Drosophila melanogaster, GI24581222, Length=114, Percent_Identity=41.2280701754386, Blast_Score=92, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12506; Mature: 12506
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDCLFCKMASGAIPVKKVYEDDELFAIEDINPVAPLHMLIIPKKHLANALALAPEDDRI CCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEECHHHHHHHEECCCCCCHH IGAIHRVAAKLARERGMDEEGFRLVNNTNAGAGQSVFHIHFHLLAGRNLGWPPG HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCC >Mature Secondary Structure MNDCLFCKMASGAIPVKKVYEDDELFAIEDINPVAPLHMLIIPKKHLANALALAPEDDRI CCCEEEEEECCCCCCHHHHCCCCCEEEECCCCCCCCEEEEEECHHHHHHHEECCCCCCHH IGAIHRVAAKLARERGMDEEGFRLVNNTNAGAGQSVFHIHFHLLAGRNLGWPPG HHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]