| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119018
Identifier: 197119018
GI number: 197119018
Start: 3057673
End: 3058185
Strand: Reverse
Name: 197119018
Synonym: Gbem_2641
Alternate gene names: NA
Gene position: 3058185-3057673 (Counterclockwise)
Preceding gene: 197119019
Following gene: 197119017
Centisome position: 66.26
GC content: 57.31
Gene sequence:
>513_bases ATGGCAGAGCTTTGCGAAGAAGCATTCGATGTGCTGAAGATAGACAAGAAAGATTACGTCCCGACCACCCTTGAAGACGA GGTGAGGGTGGACAAGCTTTGCAGCGACCTGCTGCACCGGTTCTACGCCGAGAGTCAGATGGCCGGGCTTTCTCCCGAAG ACGCCACCGCGCTTGCGGGCGCCGCCGACTACTTCGTCAGGGATTTTGTAGTTTCCATCAAGGGGCGCAGCCTCTTCGAC GAGCGTTCCGGCATTGTGCGACAGTTCGCCGGCAACTGGTACATCGTCAATACCATGGAACCGCTCGCCACCGAGATCGA GGGATACCTCGCCGGCATCCGCGAGTTCTACCGTTTTCTGTACGGCCACCAGCTCATCTCCCTGAAGTTCCTCCAAGCCA TCGAAGCTGAGTGCTCGCAGCTCGATTACTACGCGCAGCGCATCGAATCCTTCTGGGACATCACCGGCGACGGCTATTTC GATTGGGAGAAGGAGTGCACACTCAAGGACTAA
Upstream 100 bases:
>100_bases GACGGCCACAGAAGCCGCAAGGTGTTGTGGCTCCAAGAGGAAAAACGTACTGAACCTTGAACGTTGAACGTTGAACAGAT TTCAGGATAAGAGGAGCGCC
Downstream 100 bases:
>100_bases AGCAAAGATAAAACCAGAGGCAAAAACCTTTCACCACAGAGGACACAGAGGGTCACAGAGGAAAAACAGAAACAGGGGAA AAACAAAATCTTCTTGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAELCEEAFDVLKIDKKDYVPTTLEDEVRVDKLCSDLLHRFYAESQMAGLSPEDATALAGAADYFVRDFVVSIKGRSLFD ERSGIVRQFAGNWYIVNTMEPLATEIEGYLAGIREFYRFLYGHQLISLKFLQAIEAECSQLDYYAQRIESFWDITGDGYF DWEKECTLKD
Sequences:
>Translated_170_residues MAELCEEAFDVLKIDKKDYVPTTLEDEVRVDKLCSDLLHRFYAESQMAGLSPEDATALAGAADYFVRDFVVSIKGRSLFD ERSGIVRQFAGNWYIVNTMEPLATEIEGYLAGIREFYRFLYGHQLISLKFLQAIEAECSQLDYYAQRIESFWDITGDGYF DWEKECTLKD >Mature_169_residues AELCEEAFDVLKIDKKDYVPTTLEDEVRVDKLCSDLLHRFYAESQMAGLSPEDATALAGAADYFVRDFVVSIKGRSLFDE RSGIVRQFAGNWYIVNTMEPLATEIEGYLAGIREFYRFLYGHQLISLKFLQAIEAECSQLDYYAQRIESFWDITGDGYFD WEKECTLKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19624; Mature: 19493
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELCEEAFDVLKIDKKDYVPTTLEDEVRVDKLCSDLLHRFYAESQMAGLSPEDATALAG CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AADYFVRDFVVSIKGRSLFDERSGIVRQFAGNWYIVNTMEPLATEIEGYLAGIREFYRFL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH YGHQLISLKFLQAIEAECSQLDYYAQRIESFWDITGDGYFDWEKECTLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AELCEEAFDVLKIDKKDYVPTTLEDEVRVDKLCSDLLHRFYAESQMAGLSPEDATALAG HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH AADYFVRDFVVSIKGRSLFDERSGIVRQFAGNWYIVNTMEPLATEIEGYLAGIREFYRFL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH YGHQLISLKFLQAIEAECSQLDYYAQRIESFWDITGDGYFDWEKECTLKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA