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The map label for this gene is 197119006

Identifier: 197119006

GI number: 197119006

Start: 3044838

End: 3046103

Strand: Direct

Name: 197119006

Synonym: Gbem_2629

Alternate gene names: NA

Gene position: 3044838-3046103 (Clockwise)

Preceding gene: 197119005

Following gene: 197119007

Centisome position: 65.97

GC content: 61.77

Gene sequence:

>1266_bases
ATGCGAAGAGCATTGATTATACTGGCATTGACGGCGCTCACTGGAACAGGCGCGGCTAGCGCCGAGACCCTCACTCTGCA
GGAGTGCCTCACCAAGGCGGCTGCAAGCAGCAGGGGGCTCAAGGCCAGCACCCATGACGTGGCGATCGCGCAGGAACAGA
TTTCCATTGCCCGCAGCGCAAGGCTGCCGCGGGTGGACCTGCAGGCCGGGTACACCGCGCAACTGGACCCACAGGCAGTA
AAATTCGGCAACATCGTCCAGGAAACACAGGATGCCCGCTACCCCTTCCTGAACCTCACCATTTACAACACCCTGTACGA
TTTCGGGCGCACCGGCGCCCGCGAGGCGAGAGCCCGGCTGCAGAGCGACGCGGCGCAGTTCTCCCACTTTGGCCAGGAGC
AGGACCTGTTCCTGGAGGTGGTGCGCGCCTACTTCGGCATCCTCGCCGCGGAGAAGCTGGTCGGCGCTGCCAACGACGAG
GTGGTCCAGATGACCGCCCACCAGAAGACGGCCCAGGCGCTGTTCGAAGAGGGCGTGGTGACGCGCAACGACCTCTTGCA
GGCCGAGGTGCGGGTGGCTTCCAGCAGGCAGAACCTTTACGGAGCCCTGAACCAGATAGAAAACGGCTGGCTCTACCTGA
ACTACCTCACCGGCGTCCCCGCCAGTTACCGCGCCGACCTCCAGGAACAGATCGAGACTCCCCCCCTTCCCGACCAGCAG
GCTGTCCCAGACCTTTCCAAGCGCGCAGAGATATCCGCTCTCAGGGCTTTGGTCAATGCGGACGAGCACGCCGTCAAAGA
GGCGAAAAGCGATTATTATCCGGAGATCTTTGCCAGGTTCGGCTTGGACTATCTGGACAACAGCAAGGTACGCGAGCAAA
CCATTTACGCTGCGACGCTTGGGCTCAAGGTGAATCTCTTCGACGGAGCCGCCAAGGAAGCAAGGATCCGCCAGGCGGTC
GAGTCACGGGCGAGAGACGAAGAGCGGATGAGGGACCTGGAAGACCGGGTGAGGCTCGAACTGTCGACGGCACAAAACGA
CATGAAGGTCGCGCTCACGCGGCTCAAGGTTGCCGAGAAGGCGATAGAGCAAGGAAGGGAAAACCTCCGCATCACCCGCG
ACCGTTACCAGGAAAAAGTCGGCACCGCCACCGAGGTTATCGACGCCCAAACCCTCCTTACCCAGACCAGAACCGACTAC
TTTCGCAGCATGTTCGACCTGCAGGTAGCCGCAGCCCGGGTGAAACGGGCGACGGGAGAGCTGTAA

Upstream 100 bases:

>100_bases
CTGAAAGCCCAGCGCAAGCTGGTAGCGAAACTGACCTCCGAAGAACAGGAAACCTTGAAGTCGCTGTTGGAAAAGATCCG
CAGCTGATCCGGGAGCTTTC

Downstream 100 bases:

>100_bases
CGCAAAAGGCAGGACTTATCTGACGCAACCAAAATTTCTTGAGGTTCATATAAATGGCTGAAGAAACAAACCAGACTACT
GAAAATAACGAAACGAATCC

Product: RND family efflux pump outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein; Type I Secretion Outer Membrane Protein; RND Family Efflux Pump Outer Membrane Protein; Outer Membrane Efflux Family Protein; Outer Membrane Macrolide Efflux Protein; Outer Membrane Efflux Protein Domain-Containing Protein; Efflux System Outer Membrane Protein; Outer Membrane Protein-Like; Type I Secretion Outer Membrane Protein lC Family

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MRRALIILALTALTGTGAASAETLTLQECLTKAAASSRGLKASTHDVAIAQEQISIARSARLPRVDLQAGYTAQLDPQAV
KFGNIVQETQDARYPFLNLTIYNTLYDFGRTGAREARARLQSDAAQFSHFGQEQDLFLEVVRAYFGILAAEKLVGAANDE
VVQMTAHQKTAQALFEEGVVTRNDLLQAEVRVASSRQNLYGALNQIENGWLYLNYLTGVPASYRADLQEQIETPPLPDQQ
AVPDLSKRAEISALRALVNADEHAVKEAKSDYYPEIFARFGLDYLDNSKVREQTIYAATLGLKVNLFDGAAKEARIRQAV
ESRARDEERMRDLEDRVRLELSTAQNDMKVALTRLKVAEKAIEQGRENLRITRDRYQEKVGTATEVIDAQTLLTQTRTDY
FRSMFDLQVAAARVKRATGEL

Sequences:

>Translated_421_residues
MRRALIILALTALTGTGAASAETLTLQECLTKAAASSRGLKASTHDVAIAQEQISIARSARLPRVDLQAGYTAQLDPQAV
KFGNIVQETQDARYPFLNLTIYNTLYDFGRTGAREARARLQSDAAQFSHFGQEQDLFLEVVRAYFGILAAEKLVGAANDE
VVQMTAHQKTAQALFEEGVVTRNDLLQAEVRVASSRQNLYGALNQIENGWLYLNYLTGVPASYRADLQEQIETPPLPDQQ
AVPDLSKRAEISALRALVNADEHAVKEAKSDYYPEIFARFGLDYLDNSKVREQTIYAATLGLKVNLFDGAAKEARIRQAV
ESRARDEERMRDLEDRVRLELSTAQNDMKVALTRLKVAEKAIEQGRENLRITRDRYQEKVGTATEVIDAQTLLTQTRTDY
FRSMFDLQVAAARVKRATGEL
>Mature_421_residues
MRRALIILALTALTGTGAASAETLTLQECLTKAAASSRGLKASTHDVAIAQEQISIARSARLPRVDLQAGYTAQLDPQAV
KFGNIVQETQDARYPFLNLTIYNTLYDFGRTGAREARARLQSDAAQFSHFGQEQDLFLEVVRAYFGILAAEKLVGAANDE
VVQMTAHQKTAQALFEEGVVTRNDLLQAEVRVASSRQNLYGALNQIENGWLYLNYLTGVPASYRADLQEQIETPPLPDQQ
AVPDLSKRAEISALRALVNADEHAVKEAKSDYYPEIFARFGLDYLDNSKVREQTIYAATLGLKVNLFDGAAKEARIRQAV
ESRARDEERMRDLEDRVRLELSTAQNDMKVALTRLKVAEKAIEQGRENLRITRDRYQEKVGTATEVIDAQTLLTQTRTDY
FRSMFDLQVAAARVKRATGEL

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46923; Mature: 46923

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRALIILALTALTGTGAASAETLTLQECLTKAAASSRGLKASTHDVAIAQEQISIARSA
CCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
RLPRVDLQAGYTAQLDPQAVKFGNIVQETQDARYPFLNLTIYNTLYDFGRTGAREARARL
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHH
QSDAAQFSHFGQEQDLFLEVVRAYFGILAAEKLVGAANDEVVQMTAHQKTAQALFEEGVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCC
TRNDLLQAEVRVASSRQNLYGALNQIENGWLYLNYLTGVPASYRADLQEQIETPPLPDQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCC
AVPDLSKRAEISALRALVNADEHAVKEAKSDYYPEIFARFGLDYLDNSKVREQTIYAATL
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCHHCCCCHHHHHHHHEEEE
GLKVNLFDGAAKEARIRQAVESRARDEERMRDLEDRVRLELSTAQNDMKVALTRLKVAEK
CEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEHHHHCCCHHHHHHHHHHHHHH
AIEQGRENLRITRDRYQEKVGTATEVIDAQTLLTQTRTDYFRSMFDLQVAAARVKRATGE
HHHHCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
L
C
>Mature Secondary Structure
MRRALIILALTALTGTGAASAETLTLQECLTKAAASSRGLKASTHDVAIAQEQISIARSA
CCCCEEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC
RLPRVDLQAGYTAQLDPQAVKFGNIVQETQDARYPFLNLTIYNTLYDFGRTGAREARARL
CCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHH
QSDAAQFSHFGQEQDLFLEVVRAYFGILAAEKLVGAANDEVVQMTAHQKTAQALFEEGVV
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCC
TRNDLLQAEVRVASSRQNLYGALNQIENGWLYLNYLTGVPASYRADLQEQIETPPLPDQQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEHHCCCHHHHHHHHHHCCCCCCCCCC
AVPDLSKRAEISALRALVNADEHAVKEAKSDYYPEIFARFGLDYLDNSKVREQTIYAATL
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHCCHHCCCCHHHHHHHHEEEE
GLKVNLFDGAAKEARIRQAVESRARDEERMRDLEDRVRLELSTAQNDMKVALTRLKVAEK
CEEEEECCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHEHHHHCCCHHHHHHHHHHHHHH
AIEQGRENLRITRDRYQEKVGTATEVIDAQTLLTQTRTDYFRSMFDLQVAAARVKRATGE
HHHHCHHHCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA