| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is marR [C]
Identifier: 197119005
GI number: 197119005
Start: 3044396
End: 3044824
Strand: Direct
Name: marR [C]
Synonym: Gbem_2628
Alternate gene names: 197119005
Gene position: 3044396-3044824 (Clockwise)
Preceding gene: 197119000
Following gene: 197119006
Centisome position: 65.97
GC content: 56.88
Gene sequence:
>429_bases ATGCCAGCAAAAACACCGATCGAGATAGAGAAGACCGTGGGATTTCTCTTGTCCAAGGCTTATCAGCGCGCCAGCCTCAT CTTCAAGGAACACTTCGACGAATACGATCTCACTCCACAACAATTCGGTCTGCTGGGTTTCTTGTGGCGCGAGGATGGGC TGAGCCAGTCCGTGCTCTCTGCTAAGAGCCAAATCGACAGAACAACCATGGGCGGCCTGATCGACAGGCTGGAAAAAGAG GGGCTGGTGGCCAGGCAGGCGGACCCTGACGACCGCCGCGCCTATCGCATCTGCCTCACGGCAAAAGGAAAGGCGCTGCA GCCGGAACTGACGCCGCTGGCACTGAAAGCCCAGCGCAAGCTGGTAGCGAAACTGACCTCCGAAGAACAGGAAACCTTGA AGTCGCTGTTGGAAAAGATCCGCAGCTGA
Upstream 100 bases:
>100_bases TGATATACTGCCGTGATTTACAGCTGTTAAACTGCTTTGTTGCTTTGTTTTACGCGCGCCGTACTCACGGGTAACCGCTT CGAAAGAAGGGGGGCTTTAT
Downstream 100 bases:
>100_bases TCCGGGAGCTTTCATGCGAAGAGCATTGATTATACTGGCATTGACGGCGCTCACTGGAACAGGCGCGGCTAGCGCCGAGA CCCTCACTCTGCAGGAGTGC
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulatory Protein; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator Marr Family; Transcription Regulator MarR Family; Transcriptional Regulator MarR; Transcriptional Regulatory Marr Family Protein; Transcription Regulator Protein; Transcriptional Regulator PecS
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MPAKTPIEIEKTVGFLLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLSAKSQIDRTTMGGLIDRLEKE GLVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRKLVAKLTSEEQETLKSLLEKIRS
Sequences:
>Translated_142_residues MPAKTPIEIEKTVGFLLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLSAKSQIDRTTMGGLIDRLEKE GLVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRKLVAKLTSEEQETLKSLLEKIRS >Mature_141_residues PAKTPIEIEKTVGFLLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLSAKSQIDRTTMGGLIDRLEKEG LVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRKLVAKLTSEEQETLKSLLEKIRS
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16048; Mature: 15917
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAKTPIEIEKTVGFLLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHH AKSQIDRTTMGGLIDRLEKEGLVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH LVAKLTSEEQETLKSLLEKIRS HHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure PAKTPIEIEKTVGFLLSKAYQRASLIFKEHFDEYDLTPQQFGLLGFLWREDGLSQSVLS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHH AKSQIDRTTMGGLIDRLEKEGLVARQADPDDRRAYRICLTAKGKALQPELTPLALKAQRK HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHH LVAKLTSEEQETLKSLLEKIRS HHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA