| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is kdpA
Identifier: 197118985
GI number: 197118985
Start: 3025051
End: 3026835
Strand: Reverse
Name: kdpA
Synonym: Gbem_2608
Alternate gene names: 197118985
Gene position: 3026835-3025051 (Counterclockwise)
Preceding gene: 197118986
Following gene: 197118984
Centisome position: 65.58
GC content: 59.22
Gene sequence:
>1785_bases ATGAACGCATATGAATGGATACAGTCGGTGGTTCTTTTCGCGGTCCTATTGTTGGCAATAAAGCCGATGGGAAGCTTTAT GGCCAAGATCTTCCAGGGGGACAGGACGTTTCTCTCGCGGTTGTTGGTCCCCTGTGAGAGTTTTATTTACCGCGTCTGCG GCATCGACAAGGACGAGGAAATGGGGTGGCAGCAGTACGCCTGGGCCCTGCTTCTGTTTAACCTCATCTGCGGCGTCGCC CTCTTTTTCATACTTCTGCTCCAGGGGGTCCTTCCTCTGAATCCACAGAAGTTCCCTGCCTTTTCCTGGCATTTGGCGCT CAACACGGCCGTCAGCTTCATGACCAACACCAACTGGCAAAATTACGGCGGCGAATCGACGGCAAGCTACTTCACCCAGA CGTTCGGCTTTGCAGTGCACAACTTCCTATCGGCCGCCACCGGCATCGTCGTTGCGATCGCCACCATTCGCGGGTTTGTC CGGCGCAGGGTTTCCAAGATCGGCAACTTCTACGTCGACATCGCCAGGTGCACTCTGTACCTCCTGCTCCCCGTCTCCCT TGTCTTCGCGGTCTTCCTGGTTTCCCAGGGGGTGATCCAGAACTTCAGCGGCTATCGGACGGTGCCGCTGGTCCAGGCGA CCAGCTACCTAAAGCCCAAACTGGATGCAACAGGTAACGCGCTGAAGGACCCCAAAGGGAACAGCATTACCGAAACCATC CAGGTTAAGGAGGTCACCATCCCCATGGGACCGGTCGCCTCCCAGGAGGCTATCAAGGAACTGGGCACCAACGGCGGCGG GTTCTTCAACGCCAATTCGGCGCATCCTTACGAGAATCCGACCCCGCTCGCCAATGTCGTCGAGGTCTTCCTGATGCTCC TCATCGGCGGCAGCCTCACCTACACCTTCGGGGTGATGGCAGGCAATACGCGACAGGGGTGGGCTATTCTGGCGGTGATG TTGGCCATCCTGGTGACGGCGGTCGGGACCCTCTACTGGGCCGAGACGAGCGGCAATCCCCTGGTCGCCAAACTCGGGGT GCACGGAGTCAATATGGAAGGTAAGGAGACTCGCTTCGGCGTCGCCGGGACTTCCCTGTTCACTTCCGCCGCAACCGGCA CCTCCTGCGGAGCCGTCAACGCCATGCACGATTCCATGACCCCGATAGGCGGAATGATCCCCCTGTCGCTGATCCTCCTC TCGGAAGTGGTGGTCGGCGGGGTGGGAACCGGCCTATACACCATGATCGCCTTCGTGGTGATCTCGGTCTTCATTGCGGG GTTGATGATCGGCCGCACTCCGGAGCTGCTCGGGAAAAAGATCGAGGTGCGCGAGATGTGGATGTCGATCATCACCGTGC TTACTTCCGGAATACTGGTGCTGATCTTTTCGGGCCTTGCGCTTGTGGTCCCGTCCGCCGTCTCCTCTATGGCTAATCCG GGCGCGCACGGGCTCTCGGAGGTGCTCTACGCCTTCGCCTCCATGTCCAACAATAACGGCAGCGCCTTCGCGGGGCTAAA CGGCAACACCATCTTCTACAACGTAACCGGCGCGATTGCCATGTTCCTCGGGCGCTTCGCCCCCATTGTCGCCTCGCTTG CCATGGCGGGGTCCCTGGCGCAGAAGAAGTTCATTCCCGCCAGCCTCGGAACTCTTCCCACGGACAAGATACCCTTCGCA CTATGGCTGACGCTGGTGATACTCATCGTCGGTGCGCTCACCTTCTTCCCCGCCCTTTCGCTGGGGCCGATCGTCGAACA CCTGATCATGCTGGGAGGTAAGTAA
Upstream 100 bases:
>100_bases TTAATACCTTCAACAGGCATTTTAACACCGTCTTTAGGCGCTCGGCGATATGGTGATACTCAGCAGCGAGTTATAAAAAG TCGCATAAGCGGAGAACATC
Downstream 100 bases:
>100_bases CATGTCCAAACACGCACCGGAACCCATATCCATGTTCGATGCGCGGATCCTGAAGCCCGCGCTGCTGGAATCGATAAAGA AGCTCGACCCGAGAGGGCTG
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain
Number of amino acids: Translated: 594; Mature: 594
Protein sequence:
>594_residues MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK
Sequences:
>Translated_594_residues MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK >Mature_594_residues MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family
Homologues:
Organism=Escherichia coli, GI1786915, Length=579, Percent_Identity=49.740932642487, Blast_Score=534, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKA_GEOBB (B5EH80)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139412.1 - GeneID: 6782605 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2608 - HOGENOM: HBG291815 - OMA: YLTQMIG - ProtClustDB: PRK05482 - HAMAP: MF_00275 - InterPro: IPR004623 - PIRSF: PIRSF001294 - TIGRFAMs: TIGR00680
Pfam domain/function: PF03814 KdpA
EC number: =3.6.3.12
Molecular weight: Translated: 63405; Mature: 63405
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x22cb6a54)-; HASH(0x232b7888)-; HASH(0x21d61e28)-; HASH(0x232e151c)-; HASH(0x23207e4c)-; HASH(0x230ae194)-; HASH(0x20e2cb70)-; HASH(0x22ab3eb8)-; HASH(0x2255dcc4)-; HASH(0x222b097c)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH MGWQQYAWALLLFNLICGVALFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCC NYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFVRRRVSKIGNFYVDIARCTLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLT EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH YTFGVMAGNTRQGWAILAVMLAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFG HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCC VAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILLSEVVVGGVGTGLYTMIAFVV CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLA CCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QKKFIPASLGTLPTDKIPFALWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK HHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH MGWQQYAWALLLFNLICGVALFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCC NYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFVRRRVSKIGNFYVDIARCTLY CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLT EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH YTFGVMAGNTRQGWAILAVMLAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFG HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCC VAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILLSEVVVGGVGTGLYTMIAFVV CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH ISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLA CCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH QKKFIPASLGTLPTDKIPFALWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK HHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA