| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197118944
Identifier: 197118944
GI number: 197118944
Start: 2977612
End: 2978511
Strand: Reverse
Name: 197118944
Synonym: Gbem_2567
Alternate gene names: NA
Gene position: 2978511-2977612 (Counterclockwise)
Preceding gene: 197118945
Following gene: 197118943
Centisome position: 64.54
GC content: 59.0
Gene sequence:
>900_bases ATGGACGCTCCGCCGATAGCTCTGTTCGCGTATAACCGCCTGACCCACACCAGGCGCACCGTCGAGGCACTGCAAAAGAA CCATGGTGCGGACAAGAGTCCCCTCTACGTCTTTTGCGACGGTCCCAAAAGCGAGCGCGATCTCGACGCCGTCAACGAGG TTCGAGCCTATCTTAAGGGCGTCGACGGATTTTCATCGGTAGAGGTGATCGAGAGCGAGGCGAACGCAGGTCTTGCCGCC TCCCTGACAAGGGGGATCTGCTTGGTCCTCGATGAGTACGATTCCATAATCGTGCTGGAAGACGATCTGGTCACCTCTCC CTATTTTCTGAAGTTCATGCGTGACGCATTGCGCCGCTACCGGGACGAGGAGAGGGTGGCGTCGGTAAGCGGATACTCCT TTCCTCTGGGCATAAAAACCGCCGAAACCTTTCTCTTGAACTACACGGCCTGCTGGGGGTGGGGTACCTGGCGCAGGGGC TGGCAGCTCTTCGAGCCCTCGGGGGAAAAGCTCCTATCGGAAATCGGCAAGAGGGGCCTTAGCCACGAGTTCGACATGCG GGGCGCCTATCCCTACACCCGGATGCTTGAGGACCAGTGCCGCGGCAAGGTTGACTCGTGGGCTGTGCGGTGGCACGCCT CGCTCTTTCTCGCGGGCAGGCTCATGCTTTTTCCCGGCAGATCCCTGGTCAACAACATAGGCCATGACGGAAGCGGGGTG AATTGCCAAGGCGCCTCCCACTTTGACGTCACCCTCTCGGATACGGCGGTCCTGATAGGGGACGTACCGCTTGCCGCGGA TGCCACGGTTGCCGCCGCAATGGAAAAGTTTTTCAGGGAGCTGAACCCTGGGCTGTTCCGTTACCTACTGCGCAAATTAA CCACGAGATTCTCACTATGA
Upstream 100 bases:
>100_bases GCCTATCTGTCGCGTGAAACAACCACGGGGGCGGACGCCAACGTGCCGTTCGATGACAGTCAGAGCCATGACGGAACAGA CGCAGTCAGAAGGTGAAACC
Downstream 100 bases:
>100_bases CGCTTACTCCCGACATACGGACCGCCGGCAGGGAACCTCTCATGATGCTGAACGTGGGTTGCGGCGACACATCGCATCCT GACTGGACCAACCTGGACTT
Product: glycosyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL
Sequences:
>Translated_299_residues MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL >Mature_299_residues MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33511; Mature: 33511
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKG CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC VDGFSSVEVIESEANAGLAASLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRY CCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH RDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRGWQLFEPSGEKLLSEIGKRGL CCHHHHHHCCCCCCCCCCHHHHHHHEECCEEECCCHHHCCCEEECCCHHHHHHHHHHHCC SHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCC NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL CCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKG CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC VDGFSSVEVIESEANAGLAASLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRY CCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH RDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRGWQLFEPSGEKLLSEIGKRGL CCHHHHHHCCCCCCCCCCHHHHHHHEECCEEECCCHHHCCCEEECCCHHHHHHHHHHHCC SHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCC NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL CCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA