| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is pleC [H]
Identifier: 197118913
GI number: 197118913
Start: 2936286
End: 2938775
Strand: Reverse
Name: pleC [H]
Synonym: Gbem_2536
Alternate gene names: 197118913
Gene position: 2938775-2936286 (Counterclockwise)
Preceding gene: 197118914
Following gene: 197118912
Centisome position: 63.68
GC content: 57.11
Gene sequence:
>2490_bases ATGGATCTCACCTCAGGACAACATACGGATCCGGAAATACCCGGAAGGCGCGGGCGGACAGTGTATTCCTCCTTGCGGCA GTCATTGACGGCACTGCTCTTCCTGCTGGTCCTGGCCGTGATAGGTTGCCTTGTCGCTAACCGGATATATGAGGGATATC TGGCCGGCAAAGAACGCGGATCTGCCGCAATCCTCCTCGGCACCAAGGGATATGCGTTGTCGGCCGGCATCACCAGGAGG GTCGCACTCCTGGAAGGGCTTTATGCCTTTACCGAGGCGAATACTTCTGAGTCGGATTTCGGGAGACGGTTCGACGTTTA TGCCGCTGGGCTCCATGCGGGGGCCAAGGACGTTCGCCTTTTTGCCATAACCAGGGAAGGCGTCATCCGTTACCTTTACC CGGTCAAAGGAAACGAGCGGGCGATGGAACTTGATCTGTTTCTCGCTCCACTAACGCGGGAAGATGCCTTAAGGACTTTG AACAGCCGGGGCACCACTCTGAGCAACCCCTATGAATTGCGTCAAGGAGGCCTCGGAGTGGTGGCGCGCAAAGCGGTCTT CGCCAAGGGGGAGTTCTGGGGGTTCGCGACCTTGGTCATCGATATCCCGTCAGTTCTCGCAGAGGCGGGACTGGATCGTC AAGATCGCCTTGACATGACGGTGCGGGATCGAGCCGGGAAGGTTTTTTACGGTGACGCCGGGATATTCGCCAAGTCGCCG GTCATGCTGCACATCGGGCTTCCTGAAGGCTACTGGGAACTTGCAGCCGTTCCAAAAGGCGGATGGGAGGCTCCCGTCCG CAGAGATCTCCTGATCTTCAGGCTGGGGACCTTTTTTACTGCGTCCTGTCTCGCTTTCATTGTCTTCCAGATTTACGATC GGCAACGGCGCCTCCGCAATGCGGTTCAAGAGCGGACGGCGGCGCTGAAGGAGATCGAAAATTATAACCGTACCTTGTTC GAACTCTCTCCTATCGGCCTTGCCCTATGCAGCATGGACGGTGTGCTCGTGGACGTGAACACTGCTTATGCCGACATTTT GGGGAGAACAGTCGCAGAGACGCTGGGACTTAGCTATTGGGAGATAACTCCTGAGAAATACGAGGACCAGGAAAGAATGC GACTTGAACGGCTCGAAACGGTGGGCTTTTATGGTCCGTACGAGAAGGAGTACTGCCGCAGGGACGGCCGCTTGGTCCCG GTCCGGCTCCATGGTCGCATCATTGAACGTAACAAAGCCCGTTTCATCTGGTCCAGCGTCGAGGATATCACCGATCGCAA ACATGCCGAGGCCGAGATTAAACGCGAGCACGCCTTCTCGGAAGCTCTTATCGACAGCCTTCCCGGTGTCGTCTATCTAT ACGACCAGGAGATGAACTTCCTCAGGTGGAACAAAAACTTCGAGCGGGTTACCGGTTATGCGCCGGAAGAGATCTTGCGT CTGCAGCCGCTGGACTTTTTCGTAGAAAAGGATAAGGCGCTGCTCCAGAGCAGGATACAAGAGGTCTTCGTCAAAGGGGC GTCGAATGTGGAGGCCGGGTTCGTGGCCAAAGACGGCAGCAGCGCCCCATACTTCTTCACCGGTTTGAGAACCGAGATCG ATGGCAAGACCTGTTTGATAGGGATAGGGATCGACATCTCCGACCGCAAACGTTTAGAGGAAGAACTGACCGCCCTGAAC CTCAATCTTGAGACCCGCGTAGCGGAGCGGACCCAGGAACTGAACGAGAAGAGCGCCCAGCTCGCAGCCGCCAACGAGAA GCTCAAGGAAGTCGACCGCCTGAAGTCGATGTTCATCGCGTCCATGAGCCACGAGCTGCGCACCCCGCTGAATTCGGTGA TAGGGTATTCGAGCATCATCCTCAATGAGTGGCTCGGACCTCTGCAGCCGACCCAGAAGGAGAATCTGGCCATCGTACTG CGCGCCGGCAAGCACCTCCTTTCCCTGATAAACGACGTCATCGACGTTTCCAAGATCGAAGCGGGTCAAATCGAGGTACA TAATGAGGAGTTCGACCTCTTCGATCTGGTGCAGGAGGCGGCCCAGCAGCTGGAGCCCGAAATCAGGGGTAAGGGGTTGG CCTTTCCCGTCACCAATATCCACCTGCAACTGCTGGCCGACCGGCGCCGGCTGCTGCAGGCTGTGTTGAACCTGCTCAGT AATGCCATGAAGTACACGGTAGAAGGATCGATTCAGCTCGCAGTAAATTTCGATGGGACCTGGGCCGAAATCTCCGTGGC CGACTCCGGGATAGGCATCAGCGAGCAGGATGCCAAGCTGGTGTTTCAGCCCTTCCGACGGCTTGACTCTTCGCTCAGGG GAACGGTTTCCGGAACCGGGCTTGGCCTCTACCTTACCAACAAGCTGGTGAGGGAGGTGCTGGGGGGGACGATAACTTTT GTCAGCGCCGTCGGACAAGGTTCGACCTTTACCATCCGGATTCCGGTCACGGTCGGCGCCGATGCAGAGGCGAAGGAACG CGTGTCCTGA
Upstream 100 bases:
>100_bases AACGGATGAACGGGAGGTTCACCTTTCGTGACATAGTTGACGGTGCAGAGTTCAGGATCGAGATTGACAGCAAACCCGCT GCCTGAAGGAGAAGACCAAG
Downstream 100 bases:
>100_bases TCGTCTAAGGCTGGCAGCCTTTTATCGGGTGGACTGGAACATCAGGGAGTATGAAGTTATGAAGCAGGTACTGGTTATCG AAGACAATCGGGACAACCTT
Product: sensor histidine kinase lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 829; Mature: 829
Protein sequence:
>829_residues MDLTSGQHTDPEIPGRRGRTVYSSLRQSLTALLFLLVLAVIGCLVANRIYEGYLAGKERGSAAILLGTKGYALSAGITRR VALLEGLYAFTEANTSESDFGRRFDVYAAGLHAGAKDVRLFAITREGVIRYLYPVKGNERAMELDLFLAPLTREDALRTL NSRGTTLSNPYELRQGGLGVVARKAVFAKGEFWGFATLVIDIPSVLAEAGLDRQDRLDMTVRDRAGKVFYGDAGIFAKSP VMLHIGLPEGYWELAAVPKGGWEAPVRRDLLIFRLGTFFTASCLAFIVFQIYDRQRRLRNAVQERTAALKEIENYNRTLF ELSPIGLALCSMDGVLVDVNTAYADILGRTVAETLGLSYWEITPEKYEDQERMRLERLETVGFYGPYEKEYCRRDGRLVP VRLHGRIIERNKARFIWSSVEDITDRKHAEAEIKREHAFSEALIDSLPGVVYLYDQEMNFLRWNKNFERVTGYAPEEILR LQPLDFFVEKDKALLQSRIQEVFVKGASNVEAGFVAKDGSSAPYFFTGLRTEIDGKTCLIGIGIDISDRKRLEEELTALN LNLETRVAERTQELNEKSAQLAAANEKLKEVDRLKSMFIASMSHELRTPLNSVIGYSSIILNEWLGPLQPTQKENLAIVL RAGKHLLSLINDVIDVSKIEAGQIEVHNEEFDLFDLVQEAAQQLEPEIRGKGLAFPVTNIHLQLLADRRRLLQAVLNLLS NAMKYTVEGSIQLAVNFDGTWAEISVADSGIGISEQDAKLVFQPFRRLDSSLRGTVSGTGLGLYLTNKLVREVLGGTITF VSAVGQGSTFTIRIPVTVGADAEAKERVS
Sequences:
>Translated_829_residues MDLTSGQHTDPEIPGRRGRTVYSSLRQSLTALLFLLVLAVIGCLVANRIYEGYLAGKERGSAAILLGTKGYALSAGITRR VALLEGLYAFTEANTSESDFGRRFDVYAAGLHAGAKDVRLFAITREGVIRYLYPVKGNERAMELDLFLAPLTREDALRTL NSRGTTLSNPYELRQGGLGVVARKAVFAKGEFWGFATLVIDIPSVLAEAGLDRQDRLDMTVRDRAGKVFYGDAGIFAKSP VMLHIGLPEGYWELAAVPKGGWEAPVRRDLLIFRLGTFFTASCLAFIVFQIYDRQRRLRNAVQERTAALKEIENYNRTLF ELSPIGLALCSMDGVLVDVNTAYADILGRTVAETLGLSYWEITPEKYEDQERMRLERLETVGFYGPYEKEYCRRDGRLVP VRLHGRIIERNKARFIWSSVEDITDRKHAEAEIKREHAFSEALIDSLPGVVYLYDQEMNFLRWNKNFERVTGYAPEEILR LQPLDFFVEKDKALLQSRIQEVFVKGASNVEAGFVAKDGSSAPYFFTGLRTEIDGKTCLIGIGIDISDRKRLEEELTALN LNLETRVAERTQELNEKSAQLAAANEKLKEVDRLKSMFIASMSHELRTPLNSVIGYSSIILNEWLGPLQPTQKENLAIVL RAGKHLLSLINDVIDVSKIEAGQIEVHNEEFDLFDLVQEAAQQLEPEIRGKGLAFPVTNIHLQLLADRRRLLQAVLNLLS NAMKYTVEGSIQLAVNFDGTWAEISVADSGIGISEQDAKLVFQPFRRLDSSLRGTVSGTGLGLYLTNKLVREVLGGTITF VSAVGQGSTFTIRIPVTVGADAEAKERVS >Mature_829_residues MDLTSGQHTDPEIPGRRGRTVYSSLRQSLTALLFLLVLAVIGCLVANRIYEGYLAGKERGSAAILLGTKGYALSAGITRR VALLEGLYAFTEANTSESDFGRRFDVYAAGLHAGAKDVRLFAITREGVIRYLYPVKGNERAMELDLFLAPLTREDALRTL NSRGTTLSNPYELRQGGLGVVARKAVFAKGEFWGFATLVIDIPSVLAEAGLDRQDRLDMTVRDRAGKVFYGDAGIFAKSP VMLHIGLPEGYWELAAVPKGGWEAPVRRDLLIFRLGTFFTASCLAFIVFQIYDRQRRLRNAVQERTAALKEIENYNRTLF ELSPIGLALCSMDGVLVDVNTAYADILGRTVAETLGLSYWEITPEKYEDQERMRLERLETVGFYGPYEKEYCRRDGRLVP VRLHGRIIERNKARFIWSSVEDITDRKHAEAEIKREHAFSEALIDSLPGVVYLYDQEMNFLRWNKNFERVTGYAPEEILR LQPLDFFVEKDKALLQSRIQEVFVKGASNVEAGFVAKDGSSAPYFFTGLRTEIDGKTCLIGIGIDISDRKRLEEELTALN LNLETRVAERTQELNEKSAQLAAANEKLKEVDRLKSMFIASMSHELRTPLNSVIGYSSIILNEWLGPLQPTQKENLAIVL RAGKHLLSLINDVIDVSKIEAGQIEVHNEEFDLFDLVQEAAQQLEPEIRGKGLAFPVTNIHLQLLADRRRLLQAVLNLLS NAMKYTVEGSIQLAVNFDGTWAEISVADSGIGISEQDAKLVFQPFRRLDSSLRGTVSGTGLGLYLTNKLVREVLGGTITF VSAVGQGSTFTIRIPVTVGADAEAKERVS
Specific function: Member of the two-component regulatory system involved in the regulation of polar organelle development. PleC functions as a membrane-associated protein kinase that transfers phosphate to the response regulator pleD, leading to its activation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1789149, Length=254, Percent_Identity=37.7952755905512, Blast_Score=160, Evalue=4e-40, Organism=Escherichia coli, GI48994928, Length=406, Percent_Identity=27.3399014778325, Blast_Score=155, Evalue=1e-38, Organism=Escherichia coli, GI87081816, Length=263, Percent_Identity=32.6996197718631, Blast_Score=138, Evalue=2e-33, Organism=Escherichia coli, GI145693157, Length=293, Percent_Identity=32.4232081911263, Blast_Score=134, Evalue=2e-32, Organism=Escherichia coli, GI1788713, Length=418, Percent_Identity=27.7511961722488, Blast_Score=122, Evalue=1e-28, Organism=Escherichia coli, GI87082128, Length=232, Percent_Identity=29.3103448275862, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1786912, Length=285, Percent_Identity=27.719298245614, Blast_Score=96, Evalue=1e-20, Organism=Escherichia coli, GI1786600, Length=260, Percent_Identity=28.4615384615385, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1788393, Length=262, Percent_Identity=27.8625954198473, Blast_Score=79, Evalue=1e-15, Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=28.6290322580645, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=237, Percent_Identity=27.0042194092827, Blast_Score=74, Evalue=4e-14, Organism=Escherichia coli, GI1786783, Length=238, Percent_Identity=25.6302521008403, Blast_Score=66, Evalue=8e-12, Organism=Escherichia coli, GI1787894, Length=226, Percent_Identity=28.7610619469027, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788279, Length=232, Percent_Identity=28.0172413793103, Blast_Score=64, Evalue=5e-11, Organism=Escherichia coli, GI1790346, Length=241, Percent_Identity=26.5560165975104, Blast_Score=63, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 92455; Mature: 92455
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50839 CHASE ; PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLTSGQHTDPEIPGRRGRTVYSSLRQSLTALLFLLVLAVIGCLVANRIYEGYLAGKERG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SAAILLGTKGYALSAGITRRVALLEGLYAFTEANTSESDFGRRFDVYAAGLHAGAKDVRL CEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEEHHHCCCCCCEEE FAITREGVIRYLYPVKGNERAMELDLFLAPLTREDALRTLNSRGTTLSNPYELRQGGLGV EEEECCCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHCCCCCH VARKAVFAKGEFWGFATLVIDIPSVLAEAGLDRQDRLDMTVRDRAGKVFYGDAGIFAKSP HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCEECCC VMLHIGLPEGYWELAAVPKGGWEAPVRRDLLIFRLGTFFTASCLAFIVFQIYDRQRRLRN EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQERTAALKEIENYNRTLFELSPIGLALCSMDGVLVDVNTAYADILGRTVAETLGLSYW HHHHHHHHHHHHHHCCCEEEEECCHHEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCEE EITPEKYEDQERMRLERLETVGFYGPYEKEYCRRDGRLVPVRLHGRIIERNKARFIWSSV EECCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHH EDITDRKHAEAEIKREHAFSEALIDSLPGVVYLYDQEMNFLRWNKNFERVTGYAPEEILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHCCCHHHHCCCCHHHHHH LQPLDFFVEKDKALLQSRIQEVFVKGASNVEAGFVAKDGSSAPYFFTGLRTEIDGKTCLI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEECCEEECCCCEEEE GIGIDISDRKRLEEELTALNLNLETRVAERTQELNEKSAQLAAANEKLKEVDRLKSMFIA EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMSHELRTPLNSVIGYSSIILNEWLGPLQPTQKENLAIVLRAGKHLLSLINDVIDVSKIE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC AGQIEVHNEEFDLFDLVQEAAQQLEPEIRGKGLAFPVTNIHLQLLADRRRLLQAVLNLLS CCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH NAMKYTVEGSIQLAVNFDGTWAEISVADSGIGISEQDAKLVFQPFRRLDSSLRGTVSGTG HHHEEEEECEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC LGLYLTNKLVREVLGGTITFVSAVGQGSTFTIRIPVTVGADAEAKERVS EEHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEEEEEEECCCCCHHHCCC >Mature Secondary Structure MDLTSGQHTDPEIPGRRGRTVYSSLRQSLTALLFLLVLAVIGCLVANRIYEGYLAGKERG CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SAAILLGTKGYALSAGITRRVALLEGLYAFTEANTSESDFGRRFDVYAAGLHAGAKDVRL CEEEEEECCCCEECCCHHHHHHHHHHHHHHHCCCCCCHHCCCEEEEEEHHHCCCCCCEEE FAITREGVIRYLYPVKGNERAMELDLFLAPLTREDALRTLNSRGTTLSNPYELRQGGLGV EEEECCCEEEEEEECCCCCCEEEEEEEEECCCHHHHHHHHHCCCCCCCCCHHHHCCCCCH VARKAVFAKGEFWGFATLVIDIPSVLAEAGLDRQDRLDMTVRDRAGKVFYGDAGIFAKSP HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCCEECCC VMLHIGLPEGYWELAAVPKGGWEAPVRRDLLIFRLGTFFTASCLAFIVFQIYDRQRRLRN EEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVQERTAALKEIENYNRTLFELSPIGLALCSMDGVLVDVNTAYADILGRTVAETLGLSYW HHHHHHHHHHHHHHCCCEEEEECCHHEEEECCCCEEEECCHHHHHHHHHHHHHHHCCCEE EITPEKYEDQERMRLERLETVGFYGPYEKEYCRRDGRLVPVRLHGRIIERNKARFIWSSV EECCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEEEECCEEEECCCCHHHHHHH EDITDRKHAEAEIKREHAFSEALIDSLPGVVYLYDQEMNFLRWNKNFERVTGYAPEEILR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHCCCHHHHCCCCHHHHHH LQPLDFFVEKDKALLQSRIQEVFVKGASNVEAGFVAKDGSSAPYFFTGLRTEIDGKTCLI CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEECCEEECCCCEEEE GIGIDISDRKRLEEELTALNLNLETRVAERTQELNEKSAQLAAANEKLKEVDRLKSMFIA EECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SMSHELRTPLNSVIGYSSIILNEWLGPLQPTQKENLAIVLRAGKHLLSLINDVIDVSKIE HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC AGQIEVHNEEFDLFDLVQEAAQQLEPEIRGKGLAFPVTNIHLQLLADRRRLLQAVLNLLS CCEEEEECCCCCHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHH NAMKYTVEGSIQLAVNFDGTWAEISVADSGIGISEQDAKLVFQPFRRLDSSLRGTVSGTG HHHEEEEECEEEEEEEECCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC LGLYLTNKLVREVLGGTITFVSAVGQGSTFTIRIPVTVGADAEAKERVS EEHHHHHHHHHHHHCCCEEEHHHCCCCCEEEEEEEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]