| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118866
Identifier: 197118866
GI number: 197118866
Start: 2881254
End: 2881754
Strand: Direct
Name: 197118866
Synonym: Gbem_2489
Alternate gene names: NA
Gene position: 2881254-2881754 (Clockwise)
Preceding gene: 197118865
Following gene: 197118867
Centisome position: 62.43
GC content: 64.47
Gene sequence:
>501_bases ATGACAATGCCTGCAGCCTCCCCCCTCGCCATAAACGAGCAGGTCGCGCGTGAACTGGAGCGGCTGAAGAAGCGCCTTAT CAACGCCGACCGCGCCGGTGCCGACCGCTCGCGCCGGATTTCCTTCGTCTACCGCGCCGCGGAGAGCTTCAGCCGCCGGG TCTTCGGCAGCTCCTTGTGCCGCGCCGAGAGCGAAGGCGCCGGCTGCAAGACCGGCCAGTGCTGCAAGTGCAGCCCCGAC GTCTTCGCCTGCGAAAAGGAAGTCCTCGACCTCCTCCCCAAGCGCTCCGACGACAGCGGCTTTTGCCCCTTTTTCAATCT GCAAAAGCGCAACTGCGGCATCTACGGCGTCCGCCCCTTCGCCTGCCGGATCTATTACAACTTCGCCCCCTCAAGCTACT ACTGCCAAAACCCCAACGACCTCACCCTGCTGCTCTTCGACGGCGTGAGGCGCCACCTGGAGCAGATCCTGGGGCCCTAT TGCGGAGGGTACCGGCCATGA
Upstream 100 bases:
>100_bases AGGTCCTGGGAGAAAAGGTGGGCTCCCTCGCGGAACGAAGAGAAGAAATAATCGCAGCACTCGATTTCCTTTTCACCGGA TTCTAGGAAGAGACGTCATT
Downstream 100 bases:
>100_bases GCGGCACGAACAAGACCCCGCGCCACCTGGCGGAAACCGTCTGCTCCGAACTGAGGAAACGCCGGACCGCGGTCCCGGAC GAGAAGATCATCGTCGACCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTMPAASPLAINEQVARELERLKKRLINADRAGADRSRRISFVYRAAESFSRRVFGSSLCRAESEGAGCKTGQCCKCSPD VFACEKEVLDLLPKRSDDSGFCPFFNLQKRNCGIYGVRPFACRIYYNFAPSSYYCQNPNDLTLLLFDGVRRHLEQILGPY CGGYRP
Sequences:
>Translated_166_residues MTMPAASPLAINEQVARELERLKKRLINADRAGADRSRRISFVYRAAESFSRRVFGSSLCRAESEGAGCKTGQCCKCSPD VFACEKEVLDLLPKRSDDSGFCPFFNLQKRNCGIYGVRPFACRIYYNFAPSSYYCQNPNDLTLLLFDGVRRHLEQILGPY CGGYRP >Mature_165_residues TMPAASPLAINEQVARELERLKKRLINADRAGADRSRRISFVYRAAESFSRRVFGSSLCRAESEGAGCKTGQCCKCSPDV FACEKEVLDLLPKRSDDSGFCPFFNLQKRNCGIYGVRPFACRIYYNFAPSSYYCQNPNDLTLLLFDGVRRHLEQILGPYC GGYRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18717; Mature: 18585
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 6.7 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPAASPLAINEQVARELERLKKRLINADRAGADRSRRISFVYRAAESFSRRVFGSSLC CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAESEGAGCKTGQCCKCSPDVFACEKEVLDLLPKRSDDSGFCPFFNLQKRNCGIYGVRPF HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCE ACRIYYNFAPSSYYCQNPNDLTLLLFDGVRRHLEQILGPYCGGYRP EEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TMPAASPLAINEQVARELERLKKRLINADRAGADRSRRISFVYRAAESFSRRVFGSSLC CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RAESEGAGCKTGQCCKCSPDVFACEKEVLDLLPKRSDDSGFCPFFNLQKRNCGIYGVRPF HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCE ACRIYYNFAPSSYYCQNPNDLTLLLFDGVRRHLEQILGPYCGGYRP EEEEEEEECCCCEEECCCCCEEEEHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA