| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118863
Identifier: 197118863
GI number: 197118863
Start: 2879580
End: 2880383
Strand: Reverse
Name: 197118863
Synonym: Gbem_2486
Alternate gene names: NA
Gene position: 2880383-2879580 (Counterclockwise)
Preceding gene: 197118871
Following gene: 197118862
Centisome position: 62.41
GC content: 63.06
Gene sequence:
>804_bases TTGAAGATCGACCAGAAGAAACTACGGGAACTGCTTTCGGCACCGGCTTTCTCCCCGTCTCCCGACCAGCTCAGGCGCGA AGACAACGTCTTCCTGGTGGGCGGCAATCTTCCGGAACGCCAGACTCTGGAAACCCTCTACGACAGCCACTATCAAAGCA ACGCAGCCCTGTTTCACCTCACCTTCGGCGCCATCGACCAGTTTCCCAACGGCGAGGCGCTTGCCCGGGTCATCAAGAAA AACTTCAACGTGCATCTCGTGGGGAGGCTCGATTTTCCCGCCTCCTCCCGCCTCATCGAGCGGGCCTATGCCGCAGGCGT CGACATCATCGAAATCCCTTTGCCGGCTCCCGGTACCGGTGCGGGGGAGGGGCAGGACCAGGCCAAAGAGCGGCTCCAGG CCCTCAACGTAGCCCGTTCGGTATTCCCGCGTTGGTCGGTTTTCTCGACAATTGTGGCCGGGGAGGAGTCCCCTGCGGTG ACCATTTCCGGCATTGACGCCCTCCTGGCTGCCGAGATCGTCCCGCTGGTGGTCCTGTCGGGGGGGGCGGTGCGCCACCC GGAGGACGAGATCGCCAGGATCTTCACCCACCTGCAGTCTGGCTGGCGCAAGCACAGATGTGTCCTCAAGCCTTTGCTGC CGCTGATTCATCTCTCCACCCCGCTGGTTCCGGCGGCGCCGCGCAATATGCTGCGAGGCTTCATCGACAGCATCGAGGAC CGGCGCCTTTTGGCCGCCTCCGACCTGAGGCGGGTACTCAGGGTGAAAGAGGTCGCGGAGTCCTTCGACTCCGCAGGCCT GTAG
Upstream 100 bases:
>100_bases ACTGATTTGATTATATTTTGTACTTTGTCTAAAACTCGCACGTATGTGGGGTATTTATCCCCGTCATCATTTAATTGCGG CATCCGGAGGGGGAGGCAAT
Downstream 100 bases:
>100_bases GCCCAGTTCTCCCCCTCCCGCAAGGGGAGGGGGGACTTCGGCCCTCCCTCACTTATCAAAGGGGGCGAGGCAACACTCAT GGTGGAAGCCTGAGGCTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MKIDQKKLRELLSAPAFSPSPDQLRREDNVFLVGGNLPERQTLETLYDSHYQSNAALFHLTFGAIDQFPNGEALARVIKK NFNVHLVGRLDFPASSRLIERAYAAGVDIIEIPLPAPGTGAGEGQDQAKERLQALNVARSVFPRWSVFSTIVAGEESPAV TISGIDALLAAEIVPLVVLSGGAVRHPEDEIARIFTHLQSGWRKHRCVLKPLLPLIHLSTPLVPAAPRNMLRGFIDSIED RRLLAASDLRRVLRVKEVAESFDSAGL
Sequences:
>Translated_267_residues MKIDQKKLRELLSAPAFSPSPDQLRREDNVFLVGGNLPERQTLETLYDSHYQSNAALFHLTFGAIDQFPNGEALARVIKK NFNVHLVGRLDFPASSRLIERAYAAGVDIIEIPLPAPGTGAGEGQDQAKERLQALNVARSVFPRWSVFSTIVAGEESPAV TISGIDALLAAEIVPLVVLSGGAVRHPEDEIARIFTHLQSGWRKHRCVLKPLLPLIHLSTPLVPAAPRNMLRGFIDSIED RRLLAASDLRRVLRVKEVAESFDSAGL >Mature_267_residues MKIDQKKLRELLSAPAFSPSPDQLRREDNVFLVGGNLPERQTLETLYDSHYQSNAALFHLTFGAIDQFPNGEALARVIKK NFNVHLVGRLDFPASSRLIERAYAAGVDIIEIPLPAPGTGAGEGQDQAKERLQALNVARSVFPRWSVFSTIVAGEESPAV TISGIDALLAAEIVPLVVLSGGAVRHPEDEIARIFTHLQSGWRKHRCVLKPLLPLIHLSTPLVPAAPRNMLRGFIDSIED RRLLAASDLRRVLRVKEVAESFDSAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29317; Mature: 29317
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDQKKLRELLSAPAFSPSPDQLRREDNVFLVGGNLPERQTLETLYDSHYQSNAALFHL CCCCHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE TFGAIDQFPNGEALARVIKKNFNVHLVGRLDFPASSRLIERAYAAGVDIIEIPLPAPGTG EHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCC AGEGQDQAKERLQALNVARSVFPRWSVFSTIVAGEESPAVTISGIDALLAAEIVPLVVLS CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCC GGAVRHPEDEIARIFTHLQSGWRKHRCVLKPLLPLIHLSTPLVPAAPRNMLRGFIDSIED CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RRLLAASDLRRVLRVKEVAESFDSAGL CHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIDQKKLRELLSAPAFSPSPDQLRREDNVFLVGGNLPERQTLETLYDSHYQSNAALFHL CCCCHHHHHHHHCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEE TFGAIDQFPNGEALARVIKKNFNVHLVGRLDFPASSRLIERAYAAGVDIIEIPLPAPGTG EHHHHHCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEECCCCCCCC AGEGQDQAKERLQALNVARSVFPRWSVFSTIVAGEESPAVTISGIDALLAAEIVPLVVLS CCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCC GGAVRHPEDEIARIFTHLQSGWRKHRCVLKPLLPLIHLSTPLVPAAPRNMLRGFIDSIED CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH RRLLAASDLRRVLRVKEVAESFDSAGL CHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA