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The map label for this gene is sdcS [H]

Identifier: 197118862

GI number: 197118862

Start: 2877979

End: 2879430

Strand: Reverse

Name: sdcS [H]

Synonym: Gbem_2485

Alternate gene names: 197118862

Gene position: 2879430-2877979 (Counterclockwise)

Preceding gene: 197118863

Following gene: 197118861

Centisome position: 62.39

GC content: 61.57

Gene sequence:

>1452_bases
ATGAACAACGACGATTTCCTCCAAAAACCGCTGAAGATCGACAACCGCCCCATGTGGCTGATCCTGCTGGACCGTACCGC
CCGCTACCAGGTCATGGCGGCGGTGGTGCTGGTGGTAGGACTCCTGATCCGCCTTTCCCCGCCCGACGGCCTTTCGGTCG
AGGGGTACCGCTCGCTGGTGCTCTTCGGCGGCACCATATTCTTCTGGGTTTCGGGGCTCCTCCCCATCGCGGTGACCGCG
CTTCTCTCCATGGTGATGCTGCCGCTTTTGGGCATCATGGACGCCAAGAAGACCTACTCCATGTTCGGCAACGAGGCGGT
GTTCTTCATCCTGGGCGCCTTCATCCTGGCGGCGGCGATGACCGGGACCGGGATTTCCACCCGCCTTGCCCGCGCCATGC
TCGCCAAGTTCGGCAGGACCCCAAAAAGCCTCGCGCTCACCGTGTTCCTCCTCTCGGCCTTTCTCTCCTTCGTCATGAGC
GAGCACGCGGTCGCCGCCATGCTGTTCCCGGTGATCACCGAGATAACGGTGGCTCTCAACCTGGAGAAGGGGAAAAGCAG
GTTCGGGCAGCTCCTCTTCATGTCCATGGCCTGGGGCTGCATCATCGGCGGCATCGCCACCTTCCTTGGCGGTGCGCGCG
CGCCCCTTGCTGCGGGGCTCTTGAAGGAGTCGACCGGTCTTCATTTCACCTTCATAGAGTGGAGCTCCGCCGCGTGCCTC
ATCGTTTTCCCGCTCTTGTTCATCGGCTACTTCGTGCTGGTGAAGTTCTTCCCCCCGGACATCCTGGACGTGGAAGTGGG
CCGGAAGTTCCTGAACGGCAAGCGCCTGGAGACCGGGAAGATGGGGTACGACGAGATGCTTACCGCGCTGGTCATGGTCG
TCACCGTCGTCTGCTGGATGACGCTGGGCGAGAAAACCGGCCTGGCCGCCATCGCCATACTGGGAGCCGCGGCGCTCTTC
ACCTTCAAGGTCGTCACTTGGCAGAAGATCGAGGAGTACGTCAACTGGGGGATCATCCTCATGTACGGCGGGACCATAGC
GCTCGCCTCAGCCCTGGAGAAGACCGGCGCGGCGGTCTGGCTGGTGAATAAGGGGCTCGGAAACACGGAGCACTCGCCGC
TGGCCATCATCGCCGTAGTTTCCCTGGTCGCCATCATCCTTACCGAGTGCATCAGCCACGCGGCCGTGGTGGCCATCCTG
ATGCCGGTCGGCATGGGGCTTTGCCACAGCACCGGGATGGACCCGAAGGTGATGACCCTTTCCATCGCGCTCCCGGCCGG
TCTTGCCTACTGCCTGCCGATGGGAACGCCGGCAACTGCCATCGCCTATGCCTCGGGTTATCTCAAGAGCCGCGACATCA
TTGTCTCAGGCTGCGTGATCATGTTTATCTCGTGGTTGTTGTTCATGGCGTCTGTGCTCTTTGTCTGGCCCTTGATAGGT
TTGAAAATTTAG

Upstream 100 bases:

>100_bases
CACTTATCAAAGGGGGCGAGGCAACACTCATGGTGGAAGCCTGAGGCTACACGGTATAACAAAGTTGCTTTAAGAAGAGT
AGAGAGGGCGGCCAACTGAA

Downstream 100 bases:

>100_bases
CGTGGCACATGCCACCGAAAAACTGTATAAGCAGGAGGTGCGTCAGATTCAATTCTCTTTGAGGACGAGCCATGATTTCA
AAGAAGACCAAGTACGGGCT

Product: sodium/anion symporter

Products: NA

Alternate protein names: Na(+)/dicarboxylate symporter [H]

Number of amino acids: Translated: 483; Mature: 483

Protein sequence:

>483_residues
MNNDDFLQKPLKIDNRPMWLILLDRTARYQVMAAVVLVVGLLIRLSPPDGLSVEGYRSLVLFGGTIFFWVSGLLPIAVTA
LLSMVMLPLLGIMDAKKTYSMFGNEAVFFILGAFILAAAMTGTGISTRLARAMLAKFGRTPKSLALTVFLLSAFLSFVMS
EHAVAAMLFPVITEITVALNLEKGKSRFGQLLFMSMAWGCIIGGIATFLGGARAPLAAGLLKESTGLHFTFIEWSSAACL
IVFPLLFIGYFVLVKFFPPDILDVEVGRKFLNGKRLETGKMGYDEMLTALVMVVTVVCWMTLGEKTGLAAIAILGAAALF
TFKVVTWQKIEEYVNWGIILMYGGTIALASALEKTGAAVWLVNKGLGNTEHSPLAIIAVVSLVAIILTECISHAAVVAIL
MPVGMGLCHSTGMDPKVMTLSIALPAGLAYCLPMGTPATAIAYASGYLKSRDIIVSGCVIMFISWLLFMASVLFVWPLIG
LKI

Sequences:

>Translated_483_residues
MNNDDFLQKPLKIDNRPMWLILLDRTARYQVMAAVVLVVGLLIRLSPPDGLSVEGYRSLVLFGGTIFFWVSGLLPIAVTA
LLSMVMLPLLGIMDAKKTYSMFGNEAVFFILGAFILAAAMTGTGISTRLARAMLAKFGRTPKSLALTVFLLSAFLSFVMS
EHAVAAMLFPVITEITVALNLEKGKSRFGQLLFMSMAWGCIIGGIATFLGGARAPLAAGLLKESTGLHFTFIEWSSAACL
IVFPLLFIGYFVLVKFFPPDILDVEVGRKFLNGKRLETGKMGYDEMLTALVMVVTVVCWMTLGEKTGLAAIAILGAAALF
TFKVVTWQKIEEYVNWGIILMYGGTIALASALEKTGAAVWLVNKGLGNTEHSPLAIIAVVSLVAIILTECISHAAVVAIL
MPVGMGLCHSTGMDPKVMTLSIALPAGLAYCLPMGTPATAIAYASGYLKSRDIIVSGCVIMFISWLLFMASVLFVWPLIG
LKI
>Mature_483_residues
MNNDDFLQKPLKIDNRPMWLILLDRTARYQVMAAVVLVVGLLIRLSPPDGLSVEGYRSLVLFGGTIFFWVSGLLPIAVTA
LLSMVMLPLLGIMDAKKTYSMFGNEAVFFILGAFILAAAMTGTGISTRLARAMLAKFGRTPKSLALTVFLLSAFLSFVMS
EHAVAAMLFPVITEITVALNLEKGKSRFGQLLFMSMAWGCIIGGIATFLGGARAPLAAGLLKESTGLHFTFIEWSSAACL
IVFPLLFIGYFVLVKFFPPDILDVEVGRKFLNGKRLETGKMGYDEMLTALVMVVTVVCWMTLGEKTGLAAIAILGAAALF
TFKVVTWQKIEEYVNWGIILMYGGTIALASALEKTGAAVWLVNKGLGNTEHSPLAIIAVVSLVAIILTECISHAAVVAIL
MPVGMGLCHSTGMDPKVMTLSIALPAGLAYCLPMGTPATAIAYASGYLKSRDIIVSGCVIMFISWLLFMASVLFVWPLIG
LKI

Specific function: Mediates the transport of dicarboxylates across the cytoplasmic membrane via a Na(+)-electrochemical gradient [H]

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SLC13A transporter (TC 2.A.47) family. NADC subfamily [H]

Homologues:

Organism=Homo sapiens, GI29171306, Length=140, Percent_Identity=32.8571428571429, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI31795546, Length=250, Percent_Identity=22, Blast_Score=79, Evalue=8e-15,
Organism=Homo sapiens, GI31377715, Length=138, Percent_Identity=32.6086956521739, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI58761541, Length=141, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI301069353, Length=141, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI301069346, Length=138, Percent_Identity=32.6086956521739, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI301069349, Length=141, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI4506979, Length=141, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI225637552, Length=141, Percent_Identity=31.9148936170213, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI225637549, Length=141, Percent_Identity=31.9148936170213, Blast_Score=76, Evalue=7e-14,
Organism=Homo sapiens, GI19923838, Length=140, Percent_Identity=29.2857142857143, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1786986, Length=403, Percent_Identity=24.5657568238213, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786829, Length=494, Percent_Identity=21.0526315789474, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71988385, Length=461, Percent_Identity=24.9457700650759, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI32565804, Length=459, Percent_Identity=24.8366013071895, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI71989118, Length=528, Percent_Identity=23.1060606060606, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17551790, Length=498, Percent_Identity=20.281124497992, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI32564681, Length=479, Percent_Identity=20.8768267223382, Blast_Score=93, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6324340, Length=365, Percent_Identity=22.4657534246575, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281362116, Length=476, Percent_Identity=21.218487394958, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281366409, Length=507, Percent_Identity=23.0769230769231, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI17737623, Length=507, Percent_Identity=23.0769230769231, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24666468, Length=507, Percent_Identity=23.0769230769231, Blast_Score=93, Evalue=4e-19,
Organism=Drosophila melanogaster, GI45551633, Length=507, Percent_Identity=23.0769230769231, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281362114, Length=476, Percent_Identity=21.218487394958, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281362112, Length=476, Percent_Identity=21.218487394958, Blast_Score=90, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898 [H]

Pfam domain/function: PF00939 Na_sulph_symp [H]

EC number: NA

Molecular weight: Translated: 51979; Mature: 51979

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNDDFLQKPLKIDNRPMWLILLDRTARYQVMAAVVLVVGLLIRLSPPDGLSVEGYRSLV
CCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LFGGTIFFWVSGLLPIAVTALLSMVMLPLLGIMDAKKTYSMFGNEAVFFILGAFILAAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH
TGTGISTRLARAMLAKFGRTPKSLALTVFLLSAFLSFVMSEHAVAAMLFPVITEITVALN
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LEKGKSRFGQLLFMSMAWGCIIGGIATFLGGARAPLAAGLLKESTGLHFTFIEWSSAACL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHH
IVFPLLFIGYFVLVKFFPPDILDVEVGRKFLNGKRLETGKMGYDEMLTALVMVVTVVCWM
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TLGEKTGLAAIAILGAAALFTFKVVTWQKIEEYVNWGIILMYGGTIALASALEKTGAAVW
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCEEE
LVNKGLGNTEHSPLAIIAVVSLVAIILTECISHAAVVAILMPVGMGLCHSTGMDPKVMTL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SIALPAGLAYCLPMGTPATAIAYASGYLKSRDIIVSGCVIMFISWLLFMASVLFVWPLIG
EEEHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKI
CCC
>Mature Secondary Structure
MNNDDFLQKPLKIDNRPMWLILLDRTARYQVMAAVVLVVGLLIRLSPPDGLSVEGYRSLV
CCCCHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
LFGGTIFFWVSGLLPIAVTALLSMVMLPLLGIMDAKKTYSMFGNEAVFFILGAFILAAAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHH
TGTGISTRLARAMLAKFGRTPKSLALTVFLLSAFLSFVMSEHAVAAMLFPVITEITVALN
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
LEKGKSRFGQLLFMSMAWGCIIGGIATFLGGARAPLAAGLLKESTGLHFTFIEWSSAACL
ECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCHHH
IVFPLLFIGYFVLVKFFPPDILDVEVGRKFLNGKRLETGKMGYDEMLTALVMVVTVVCWM
HHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TLGEKTGLAAIAILGAAALFTFKVVTWQKIEEYVNWGIILMYGGTIALASALEKTGAAVW
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCEEE
LVNKGLGNTEHSPLAIIAVVSLVAIILTECISHAAVVAILMPVGMGLCHSTGMDPKVMTL
EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
SIALPAGLAYCLPMGTPATAIAYASGYLKSRDIIVSGCVIMFISWLLFMASVLFVWPLIG
EEEHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA