Click here to switch to the map view.

The map label for this gene is lemA [H]

Identifier: 197118856

GI number: 197118856

Start: 2872001

End: 2872606

Strand: Direct

Name: lemA [H]

Synonym: Gbem_2479

Alternate gene names: 197118856

Gene position: 2872001-2872606 (Clockwise)

Preceding gene: 197118855

Following gene: 197118857

Centisome position: 62.23

GC content: 60.4

Gene sequence:

>606_bases
ATGGACCCACTTTCCCTCTTTGTTCTGATACTGCTCGCCCTGATCGTCCTCACCGTGCTGTACGCGATCTCCAGCTACAA
CTCGCTGGTAAAGCTGCGCAACCAGTTCAAAAACGCCTTCTCCCAGATCGACGTGCAGTTGAAAAGGCGCTACGACCTGA
TCCCGAACCTGGTAGAGACGGCGAAGGCGTACATGACCCACGAGCGGGAAACACTGGAGGCTGTTATCACCGCTAGGAAC
CAAGCGGCGGCGTCGGTAAAACAGGCGGCGGGAGCCCCCGGGGAAGCGCGCGCAATGGCGCAGCTGGCAGGCGCCGAGAA
TGTCCTCACCGGGGCCCTGGGCAGGCTCTTTGCGCTCGCCGAGGCCTACCCAGACCTCAAGGCAAATCAGACCATGATGC
AACTGAGCGAAGAGATCACCTCGACGGAGAACCGGGTCGCCTTCGCCCGCCAGGCCTTCAACGACTCCGTCACCGGCTAC
AACACCTCTTGCGAAGTCTTCCCTGCCTCCATCATCGCCGGCTACTTCGGATTCAAGCAGGCGAGCCTTTTGGAAATAAA
AGAGGCCGAGCGCGAGGCGCCGCGCGTTTCCTTCGCCAAAGGCTAA

Upstream 100 bases:

>100_bases
TATTTCGAGGAGTACCTTTGAAGCTGTAGTTTAGCTTCCGACGCACGCCCTCACCCCCGCCCCTCTGAGGGCGAGGGGTA
ACCATAAGGAGACACGAACT

Downstream 100 bases:

>100_bases
GAAGCGATGAACGATTTCTTCGCCAGACAGGAGAACGCCCGCCGCAATACCGGCCGGCTGCTCTTTCTCTTCGCCCTGGC
CGTTATCGCGGTGGTGCTGG

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MDPLSLFVLILLALIVLTVLYAISSYNSLVKLRNQFKNAFSQIDVQLKRRYDLIPNLVETAKAYMTHERETLEAVITARN
QAAASVKQAAGAPGEARAMAQLAGAENVLTGALGRLFALAEAYPDLKANQTMMQLSEEITSTENRVAFARQAFNDSVTGY
NTSCEVFPASIIAGYFGFKQASLLEIKEAEREAPRVSFAKG

Sequences:

>Translated_201_residues
MDPLSLFVLILLALIVLTVLYAISSYNSLVKLRNQFKNAFSQIDVQLKRRYDLIPNLVETAKAYMTHERETLEAVITARN
QAAASVKQAAGAPGEARAMAQLAGAENVLTGALGRLFALAEAYPDLKANQTMMQLSEEITSTENRVAFARQAFNDSVTGY
NTSCEVFPASIIAGYFGFKQASLLEIKEAEREAPRVSFAKG
>Mature_201_residues
MDPLSLFVLILLALIVLTVLYAISSYNSLVKLRNQFKNAFSQIDVQLKRRYDLIPNLVETAKAYMTHERETLEAVITARN
QAAASVKQAAGAPGEARAMAQLAGAENVLTGALGRLFALAEAYPDLKANQTMMQLSEEITSTENRVAFARQAFNDSVTGY
NTSCEVFPASIIAGYFGFKQASLLEIKEAEREAPRVSFAKG

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 21972; Mature: 21972

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPLSLFVLILLALIVLTVLYAISSYNSLVKLRNQFKNAFSQIDVQLKRRYDLIPNLVET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAYMTHERETLEAVITARNQAAASVKQAAGAPGEARAMAQLAGAENVLTGALGRLFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYPDLKANQTMMQLSEEITSTENRVAFARQAFNDSVTGYNTSCEVFPASIIAGYFGFKQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCH
ASLLEIKEAEREAPRVSFAKG
HHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDPLSLFVLILLALIVLTVLYAISSYNSLVKLRNQFKNAFSQIDVQLKRRYDLIPNLVET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AKAYMTHERETLEAVITARNQAAASVKQAAGAPGEARAMAQLAGAENVLTGALGRLFALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAYPDLKANQTMMQLSEEITSTENRVAFARQAFNDSVTGYNTSCEVFPASIIAGYFGFKQ
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCH
ASLLEIKEAEREAPRVSFAKG
HHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]