| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118804
Identifier: 197118804
GI number: 197118804
Start: 2812892
End: 2813719
Strand: Reverse
Name: 197118804
Synonym: Gbem_2425
Alternate gene names: NA
Gene position: 2813719-2812892 (Counterclockwise)
Preceding gene: 197118805
Following gene: 197118803
Centisome position: 60.97
GC content: 62.44
Gene sequence:
>828_bases ATGACCTTCTCCTCCTTAAGAGCATCCGTACCTCTTTTAAAACGCCTCTTCCTTGCACTGTTGCTGGTCCTGCCCGCCTA CCAAACCTGCCAGGGCCAGACGCTCTACGAGCATTCCAGCGAACTTCTGGCGGCAAGGGCACGGCAGGTCCTTCCTGACG ACTACAGCTTCGTGGTCATGGGCGACAGCCGCGACGGTGAACGCACTTTTTTGCAGGTGCTGGCATTGGCGCGCTCCTAC AGCCCTCTATTCATCCTGCATGCCGGCGACTACTCCAACAAGGGAAGCGAGGCTGAAACCGCCAACTTCCTGTCGCTGTT GCGGCGGAGCGTACCCGAGCTCCCGGTGTTCGTCGTGGTCGGGAATCACGAGGAGCGCGAAGTCTTTGCGAAAGAGGTAG GGCCGTTAAACTTCACGCTCGATATCGCCAGGCTCGGTCTCAGGCTGGTGGCGCTCGACAACGCTGACAGCGCGCTGCGC CCAGCCGAGCAGGAGCGCCTGCGCCGCGAAATCGCCTCCGGCCCGGCCACCGTTTTCGTTTCCATGCACGTCCCCCCTCA GACCGAGCGCTGGCGCGGGCACACTTTCACCCAAGGAGTTGAGCAACTCGAAAAGACCCTGGCGGGAAGCAGGGTGCAGG GACTCTTCTTCGCCCATTCCCACCTGTACGACCGCTCCGAGTTCGCCGGCATCCCCGCCTTCATCACCGGCGGCGCCGGC GCTCCCCTGGTCTGGTTCACCCGCCACGGGGTACCGGTCAACCACATCCTGTTGGTGCGGGTGAAAAAGGGTAGGGCGAG TTACCGGATGGTGCCGCTTAAGGGGTGA
Upstream 100 bases:
>100_bases CCGTTAAAAAACACCTATTGAACCTGGGGCTTCGTCGTCAGTAGTATTTTCCACATCGACGCCCCTGCTTCAGTCACCCC TCGAAGGCTTCCTGACAACA
Downstream 100 bases:
>100_bases CTTTTACTGCCGCTGGAGAAGAGGGAAAGGCGATGGACCATGAACTGCTGGCGGAGTGCTACCGCGAGGCGCTGGCGCTT TTGCGGGAAAATTCCACGCC
Product: calcineurin-like family metallophosphoesterase
Products: NA
Alternate protein names: Metallophosphoesterase Calcineurin Superfamily; Calcineurin-Like Family Metallophosphoesterase
Number of amino acids: Translated: 275; Mature: 274
Protein sequence:
>275_residues MTFSSLRASVPLLKRLFLALLLVLPAYQTCQGQTLYEHSSELLAARARQVLPDDYSFVVMGDSRDGERTFLQVLALARSY SPLFILHAGDYSNKGSEAETANFLSLLRRSVPELPVFVVVGNHEEREVFAKEVGPLNFTLDIARLGLRLVALDNADSALR PAEQERLRREIASGPATVFVSMHVPPQTERWRGHTFTQGVEQLEKTLAGSRVQGLFFAHSHLYDRSEFAGIPAFITGGAG APLVWFTRHGVPVNHILLVRVKKGRASYRMVPLKG
Sequences:
>Translated_275_residues MTFSSLRASVPLLKRLFLALLLVLPAYQTCQGQTLYEHSSELLAARARQVLPDDYSFVVMGDSRDGERTFLQVLALARSY SPLFILHAGDYSNKGSEAETANFLSLLRRSVPELPVFVVVGNHEEREVFAKEVGPLNFTLDIARLGLRLVALDNADSALR PAEQERLRREIASGPATVFVSMHVPPQTERWRGHTFTQGVEQLEKTLAGSRVQGLFFAHSHLYDRSEFAGIPAFITGGAG APLVWFTRHGVPVNHILLVRVKKGRASYRMVPLKG >Mature_274_residues TFSSLRASVPLLKRLFLALLLVLPAYQTCQGQTLYEHSSELLAARARQVLPDDYSFVVMGDSRDGERTFLQVLALARSYS PLFILHAGDYSNKGSEAETANFLSLLRRSVPELPVFVVVGNHEEREVFAKEVGPLNFTLDIARLGLRLVALDNADSALRP AEQERLRREIASGPATVFVSMHVPPQTERWRGHTFTQGVEQLEKTLAGSRVQGLFFAHSHLYDRSEFAGIPAFITGGAGA PLVWFTRHGVPVNHILLVRVKKGRASYRMVPLKG
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30552; Mature: 30420
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSSLRASVPLLKRLFLALLLVLPAYQTCQGQTLYEHSSELLAARARQVLPDDYSFVVM CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE GDSRDGERTFLQVLALARSYSPLFILHAGDYSNKGSEAETANFLSLLRRSVPELPVFVVV ECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE GNHEEREVFAKEVGPLNFTLDIARLGLRLVALDNADSALRPAEQERLRREIASGPATVFV CCCHHHHHHHHHCCCCEEEEEHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE SMHVPPQTERWRGHTFTQGVEQLEKTLAGSRVQGLFFAHSHLYDRSEFAGIPAFITGGAG EEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCEEEECCCC APLVWFTRHGVPVNHILLVRVKKGRASYRMVPLKG CCEEEEEECCCCCCEEEEEEEECCCCCEEEEECCC >Mature Secondary Structure TFSSLRASVPLLKRLFLALLLVLPAYQTCQGQTLYEHSSELLAARARQVLPDDYSFVVM CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE GDSRDGERTFLQVLALARSYSPLFILHAGDYSNKGSEAETANFLSLLRRSVPELPVFVVV ECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEE GNHEEREVFAKEVGPLNFTLDIARLGLRLVALDNADSALRPAEQERLRREIASGPATVFV CCCHHHHHHHHHCCCCEEEEEHHHHCEEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEE SMHVPPQTERWRGHTFTQGVEQLEKTLAGSRVQGLFFAHSHLYDRSEFAGIPAFITGGAG EEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCEEEECCCC APLVWFTRHGVPVNHILLVRVKKGRASYRMVPLKG CCEEEEEECCCCCCEEEEEEEECCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA