| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is wecB-1 [H]
Identifier: 197118759
GI number: 197118759
Start: 2755573
End: 2756664
Strand: Reverse
Name: wecB-1 [H]
Synonym: Gbem_2378
Alternate gene names: 197118759
Gene position: 2756664-2755573 (Counterclockwise)
Preceding gene: 197118767
Following gene: 197118757
Centisome position: 59.73
GC content: 59.71
Gene sequence:
>1092_bases ATGAACGTCCTTCTCATCGCAGGTGCCAGGCCCAATTTCATGAAGATCGCTCCTATTTACCGCGCTTCCCTTGACTACCC TTCGGTGGCATGCAGCATCGTTCACACCGGACAGCATTACGACAAGGAGATGTCCGGCACCTTCTTCGCTGAACTGGAAA TACCCGAGCCGCGCTATTCGCTGAACGTCGGCTCGGGAAGCCACGCGGAGCAAACGGCTGCCATCATGGTCGCCTTCGAA GAGGTCTGCCTGCAGGAATCGCCAGACCTCGTGCTGGTGGTGGGTGACGTAAACTCGACCCTTGCCTGCAGTATCGTGGC GAAAAAGTGCGGGGTTGCGGTGGCGCACGTCGAGGCGGGGTTACGGAGTTTCGACCTGGCCATGCCGGAGGAGATCAACC GCATGGTGACCGACGCCATCTCCGACAGCTTCTTCGTTACCGAGGAAAGCGGCGTAGAGAACCTGCTTAGGGAAGGAAAA CAACCGGAACGGATTCATGCGGTGGGGCACGTGATGATCGACAACCTGTTGCGGCAGGTGAAGCTTCTGGAGGGGATAGA CTTATCCAGCTTCGATAGCCACCGTCTCAAGAAGGAGGCGGGGACCTATCTCTTTCTCACCCTGCACCGCCCCTCCAATG TGGACTCCAGGGAGACGTTCGCGGGGATCGCCGAGGCCATCAACGAGTTGGCCCGCCAAAGGACAATCTTCTTCCCGGTC CATCCTCGCACCAGGAATATGATGAGCGCACACGGCATCGAGTTGAGCGACAAGGTGGTCCTCCTGCCGCCGCTTGGCTA TCGGGAGGCGCTCTTTCTCTGGAAAGACGCCGAAGCTGTCCTTACCGACAGCGGAGGGCTCCAGGAGGAAACCACCGCGC TTGGGGTTCCCTGCGTAACTATCCGGGAGAATACCGAGCGTCCTGTCACGGTAGAGATTGGGACCAATGTCCTTGCCGGT ACGGCACCTGAAAAGATCCTCGCGGGATACCGGCTAAGCCTGGAGAAGCGGGGGCGGGCCAGGGTACCGCAGTTGTGGGA CGGCAGGGCCGCCGAGCGCATCTGGCAGGTATTGGCTGGAGAAGGTCGATGA
Upstream 100 bases:
>100_bases GGGTCAGGCTGCTGCGACCACGACGCCCGTCCCCTTGCACACCGTTTCGCCCTACCTAACTCTAACCCGGCTCTTGCCGC CGGATCTCGGAGGAAACCTA
Downstream 100 bases:
>100_bases AACTCGCATCAGGGCTTTATGAAGATCAAGCCGTAGTGATAGGGGGGAAGGTCGTGGCTGCCACCTTGGTTGAAGCAAAA TCCCGCCTCCTTTGCCCATG
Product: UDP-N-acetylglucosamine 2-epimerase
Products: NA
Alternate protein names: UDP-GlcNAc-2-epimerase [H]
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MNVLLIAGARPNFMKIAPIYRASLDYPSVACSIVHTGQHYDKEMSGTFFAELEIPEPRYSLNVGSGSHAEQTAAIMVAFE EVCLQESPDLVLVVGDVNSTLACSIVAKKCGVAVAHVEAGLRSFDLAMPEEINRMVTDAISDSFFVTEESGVENLLREGK QPERIHAVGHVMIDNLLRQVKLLEGIDLSSFDSHRLKKEAGTYLFLTLHRPSNVDSRETFAGIAEAINELARQRTIFFPV HPRTRNMMSAHGIELSDKVVLLPPLGYREALFLWKDAEAVLTDSGGLQEETTALGVPCVTIRENTERPVTVEIGTNVLAG TAPEKILAGYRLSLEKRGRARVPQLWDGRAAERIWQVLAGEGR
Sequences:
>Translated_363_residues MNVLLIAGARPNFMKIAPIYRASLDYPSVACSIVHTGQHYDKEMSGTFFAELEIPEPRYSLNVGSGSHAEQTAAIMVAFE EVCLQESPDLVLVVGDVNSTLACSIVAKKCGVAVAHVEAGLRSFDLAMPEEINRMVTDAISDSFFVTEESGVENLLREGK QPERIHAVGHVMIDNLLRQVKLLEGIDLSSFDSHRLKKEAGTYLFLTLHRPSNVDSRETFAGIAEAINELARQRTIFFPV HPRTRNMMSAHGIELSDKVVLLPPLGYREALFLWKDAEAVLTDSGGLQEETTALGVPCVTIRENTERPVTVEIGTNVLAG TAPEKILAGYRLSLEKRGRARVPQLWDGRAAERIWQVLAGEGR >Mature_363_residues MNVLLIAGARPNFMKIAPIYRASLDYPSVACSIVHTGQHYDKEMSGTFFAELEIPEPRYSLNVGSGSHAEQTAAIMVAFE EVCLQESPDLVLVVGDVNSTLACSIVAKKCGVAVAHVEAGLRSFDLAMPEEINRMVTDAISDSFFVTEESGVENLLREGK QPERIHAVGHVMIDNLLRQVKLLEGIDLSSFDSHRLKKEAGTYLFLTLHRPSNVDSRETFAGIAEAINELARQRTIFFPV HPRTRNMMSAHGIELSDKVVLLPPLGYREALFLWKDAEAVLTDSGGLQEETTALGVPCVTIRENTERPVTVEIGTNVLAG TAPEKILAGYRLSLEKRGRARVPQLWDGRAAERIWQVLAGEGR
Specific function: Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) to produce UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues [H]
COG id: COG0381
COG function: function code M; UDP-N-acetylglucosamine 2-epimerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-N-acetylglucosamine 2-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI48994967, Length=391, Percent_Identity=34.0153452685422, Blast_Score=133, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003331 [H]
Pfam domain/function: PF02350 Epimerase_2 [H]
EC number: =5.1.3.14 [H]
Molecular weight: Translated: 39934; Mature: 39934
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVLLIAGARPNFMKIAPIYRASLDYPSVACSIVHTGQHYDKEMSGTFFAELEIPEPRYS CCEEEEECCCCCCEEECHHHCCCCCCCCCEEEEEECCCHHCCCCCCEEEEEEECCCCCEE LNVGSGSHAEQTAAIMVAFEEVCLQESPDLVLVVGDVNSTLACSIVAKKCGVAVAHVEAG EECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCEEEEHHHHC LRSFDLAMPEEINRMVTDAISDSFFVTEESGVENLLREGKQPERIHAVGHVMIDNLLRQV HHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KLLEGIDLSSFDSHRLKKEAGTYLFLTLHRPSNVDSRETFAGIAEAINELARQRTIFFPV HHHHCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC HPRTRNMMSAHGIELSDKVVLLPPLGYREALFLWKDAEAVLTDSGGLQEETTALGVPCVT CCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCEEEECCCCCCCCHHHCCCCEEE IRENTERPVTVEIGTNVLAGTAPEKILAGYRLSLEKRGRARVPQLWDGRAAERIWQVLAG EECCCCCCEEEEECCCEECCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCC EGR CCC >Mature Secondary Structure MNVLLIAGARPNFMKIAPIYRASLDYPSVACSIVHTGQHYDKEMSGTFFAELEIPEPRYS CCEEEEECCCCCCEEECHHHCCCCCCCCCEEEEEECCCHHCCCCCCEEEEEEECCCCCEE LNVGSGSHAEQTAAIMVAFEEVCLQESPDLVLVVGDVNSTLACSIVAKKCGVAVAHVEAG EECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHCEEEEHHHHC LRSFDLAMPEEINRMVTDAISDSFFVTEESGVENLLREGKQPERIHAVGHVMIDNLLRQV HHHHCCCCHHHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH KLLEGIDLSSFDSHRLKKEAGTYLFLTLHRPSNVDSRETFAGIAEAINELARQRTIFFPV HHHHCCCCCCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEEEC HPRTRNMMSAHGIELSDKVVLLPPLGYREALFLWKDAEAVLTDSGGLQEETTALGVPCVT CCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEECCCEEEECCCCCCCCHHHCCCCEEE IRENTERPVTVEIGTNVLAGTAPEKILAGYRLSLEKRGRARVPQLWDGRAAERIWQVLAG EECCCCCCEEEEECCCEECCCCHHHHHHCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCC EGR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]